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MetabolomicsMulti-omics analysis reveals the potential for feed utilization of Cordyceps militaris mushroom substrate in laying hens

Background The intestinal microbiota, metabolites, and quorum-sensing (QS) functions of laying hens under different proportions of fermented Cordyceps militaris mushroom substrate (CMMS) replacement diets are critical for their production performance and health. However, the changes in the intest...

2025-09-09 | MTBLS12825 | MetaboLights
TranscriptomicsMushroom development in S. commune
In order to study changes in gene expression during mushroom development in Schizophyllum commune, genome wide gene expression was analysed in 4 developmental stages: vegetative mycelium, stage I aggregates, stage II primordia and mature mushrooms 4 samples: - vegetative mycelium - stage I aggregate...
ORGANISM(S): Schizophyllum commune 
2010-06-28 | E-GEOD-21265 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila mushroom body neurons
Genomic analysis of axon pruning in Drosophila mushroom body neurons identifies the RNA-binding protein Boule as a negative regulator; This SuperSeries is composed of the following subset Series:; GSE10012: Timecourse: MB neurons at the onset and early steps of axon pruning; GSE10013: EcR-dependent ...
ORGANISM(S): Drosophila melanogaster 
2008-06-18 | E-GEOD-10014 | biostudies-arrayexpress
TranscriptomicsExpression profiling of Drosophila mushroom bodies
We performed mRNA-seq of dissected Drosophila mushroom bodies, comparing to whole brain and testis mRNA seq of MB, brain and testis
ORGANISM(S): Drosophila melanogaster 
2012-02-01 | E-GEOD-33783 | biostudies-arrayexpress
TranscriptomicsUncovering the abilities of Agaricus bisporus to degrade plant biomass throughout its life cycle
The common edible mushroom Agaricus bisporus is a basidiomycete that thrives on decaying plant material in the forests and grasslands of North America and Europe. It is adapted to forest litter and contributes to global carbon recycling, degrading cellulose, hemicellulose and lignin in plant biomass...
ORGANISM(S): Agaricus bisporus 
2015-09-23 | E-GEOD-65800 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila melanogaster ablated mushroom bodies vs unablated MB to investigate the repertoire of MB genes that control initiation and maintenance of neural differentiation during learning and memory
Mushroom bodies (MBs) are the centers for olfactory associative learning and elementary cognitive functions in the Drosophila brain. To get insights of the repertoire of MB genes that control initiation and maintenance of neural differentiation as well as the repertoire of neural factors that may h...
ORGANISM(S): Drosophila melanogaster 
2007-11-01 | E-GEOD-3379 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Drosophila mushroom body neurons at the onset and early steps of axon pruning
Drosophila mushroom body (MB) γ neurons undergo axon pruning during metamorphosis through a process of localized degeneration of specific axon branches. Developmental axon degeneration is initiated at the onset of metamorphosis by the pre-pupal rise in the steroid hormone ecdysone. This study ide...
ORGANISM(S): Drosophila melanogaster 
2008-06-18 | E-GEOD-10012 | biostudies-arrayexpress
TranscriptomicsMushroom body cell type comparison
The Drosophila melanogaster mushroom bodies (MBs) are brain structures critical for olfactory memory. The approximately 2000 intrinsic MB neurons are divisible into alpha/beta neurons, alpha'/beta' neurons and gamma neurons by morphology and roles in memory processing. It has also been shown that th...
ORGANISM(S): Drosophila melanogaster 
2013-01-10 | E-MEXP-3798 | biostudies-arrayexpress
TranscriptomicsGenome-wide expression analysis of dikaryotic colonies of Schizophyllum commune: wild-type, delta-hom2, delta-fst4
The transcription factors Hom2 and Fst4 were shown to be involved in mushroom development in the basidiomycete Schizophyllum commune. When the genes encoding Hom2 or Fst4 were deleted, no mushrooms formed. In this study we performed a genome-wide expression analysis on dikaryons of wild-type, delta-...
ORGANISM(S): Schizophyllum commune 
2012-01-20 | E-GEOD-23594 | biostudies-arrayexpress
Genomicsmushroom spawn bag
Metabarcoding from Mushroom substrate
PRJNA862630 | ENA
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