Myers S S - OmicsDI

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Unknown (4642)
Transcriptomics (113)
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Genomics (41)
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Organisms

Homo sapiens (111)
Mus musculus (37)
Escherichia coli str. K-12 substr. MG1655 (6)
Escherichia coli (5)
Zea mays (5)
Enterococcus faecium (2)
Drosophila melanogaster (2)
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cellular organisms (1)
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Bacteria (1)
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Organisms

Homo sapiens (2)
Mus musculus (2)
Sensonator valentiensis (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

biostudies-arrayexpress (130)
pride (36)
EGA (15)
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Tissue

Cell culture (10)
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Disease

Acute leukemia (2)
Breast cancer (2)
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Schizophrenia (1)
Microsatellite stable (MSS) metastatic colorectal cancer (mCRC) (1)
Not Available (1)
Alzheimer's disease (1)
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Lung cancer (1)
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Systemic mastocytosis (1)
Ulcerative colitis (1)

Technology Type

Mass Spectrometry (36)
Shotgun proteomics (20)
Mass spectrometry (13)
Bottom-up proteomics (8)
Data-dependent acquisition (4)
Data-independent acquisition (3)
SWATH MS (3)
Illumina HiSeq 2000 (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Complete Genomics (COMPLETE_GENOMICS) (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)
Gel-based experiment (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Illumina NovaSeq 6000 (4)
Q Exactive (4)
API 4000 QTRAP (AB Sciex) (4)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina HiSeq 2500 (3)
Orbitrap Eclipse (3)
Gene Titan (2)
LTQ Orbitrap Velos (2)
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Q Exactive Plus (2)
Affymetrix Gene Titan (1)
Illumina HiSeq 4000 (1)
Instrument (1)
LTQ Orbitrap (1)
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LTQ XL (1)
Q Exactive HF-X (1)
Q-Exactive (1)
QExactive HFX (1)
Direct infusion MS - positive (1)
Liquid Chromatography MS - Alternating (LC-MS (Alt)) (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2013 (37)
2010 (22)
2012 (16)
2011 (15)
2023 (11)
2024 (10)
2025 (9)
2018 (9)
2021 (8)
2019 (8)
2016 (7)
2015 (7)
2014 (7)
2022 (6)
2026 (5)
2009 (5)
2007 (5)
2020 (5)
2008 (4)
2005 (3)
2017 (2)
2006 (2)

UNIPROT ID/AC

P07522 (1)
P10113 (1)
P11345 (1)
P21708 (1)
P25427 (1)
P35739 (1)
P36506 (1)
P47196 (1)
P47197 (1)
P47736 (1)
P50904 (1)
P63086 (1)
Q01986 (1)
Q62636 (1)
Q63484 (1)
Q63531 (1)
Q99MC6 (1)
Q9QX70 (1)
Q9QYV3 (1)
Q9Z1I1 (1)
Q9Z1I2 (1)

ENSEMBL ID

ENSRNOP00000009359 (1)

CHEBI ID

CHEBI:15843 (5)
CHEBI:72643 (5)
CHEBI:72651 (5)
CHEBI:72663 (5)
CHEBI:15544 (4)
CHEBI:15547 (4)
CHEBI:15550 (4)
CHEBI:15551 (4)
CHEBI:15553 (4)
CHEBI:15555 (4)
CHEBI:15647 (4)
CHEBI:15650 (4)
CHEBI:19138 (4)
CHEBI:27820 (4)
CHEBI:28158 (4)
CHEBI:28852 (4)
CHEBI:34450 (4)
CHEBI:34494 (4)
CHEBI:34784 (4)
CHEBI:38299 (4)
CHEBI:53487 (4)
CHEBI:60943 (4)
CHEBI:63966 (4)
CHEBI:63969 (4)
CHEBI:64017 (4)
CHEBI:68947|CHEBI:72815 (4)
CHEBI:72595 (4)
CHEBI:72603 (4)
CHEBI:72605 (4)
CHEBI:72606 (4)

Metabolite Name

10-HDoHE (4)
11,12-DiHETrE (4)
11-HETE (4)
12,13-DiHOME (4)
12,13-EpOME (4)
12-HEPE (4)
12-HETE (4)
13,14dh,15k-PGD2 (4)
13,14dh,15k-PGE2 (4)
13-HDoHE (4)
13-HODE (4)
13-HOTrE (4)
13-oxoODE (4)
14,15-DiHETrE (4)
14-HDoHE (4)
15-HEPE (4)
15-HETE (4)
15-HETrE (4)
15k-PGE2 (4)
16-HDoHE (4)
17-HDoHE (4)
19(20)-DiHDPA (4)
19(20)-EpDPE (4)
20-HDoHE (4)
4-HDoHE (4)
5,6-EET (4)
5-HETE (4)
6,15dk,13,14dh-PGF1a (4)
6k-PGF1a (4)
7-HDoHE (4)

First Public Date

2023 (2)
2024 (1)
2022 (1)
2021 (1)
2020 (1)
2019 (1)
2014 (1)

Modelling Approach

Ordinary differential equation model (5)
Partial differential equation model (2)

Study status

Active, not recruiting (1)

Lab affiliation

1VIB Center for Medical Biotechnology, VIB, Ghent, 9052, Belgium 2Department of Biomolecular Medicine, Ghent University, Ghent, 9052, Belgium (2)
1 VIB Center for Medical Biotechnology, VIB, Ghent, East Flanders, 9052, Belgium 2 Department of Biomolecular Medicine, Ghent University, Ghent, East Flanders, 9052, Belgium (1)
Associate Professor of Biochemistry Associate Professor of Cell Biology Duke University School of Medicine (1)
Bristol Myers Squibb (1)
Bristol-Myers Squibb, USA (1)
Department of Biochemistry Geisel School of Medicine at Dartmouth (1)
Department of Cell Biology, School of Medicine, Johns Hopkins University, Baltimore, MD, USA (1)
Department of Chemistry, Imperial College London, United Kingdom (1)
Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences (1)
Department of Immunology, University of Pittsburgh (1)
Department of Molecular Genetics Faculty of Biochemistry Weizmann Institute of Science (1)
Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR USA (1)
Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah School of Medicine, Salt Lake City, UT, USA (1)
Deputy Head of School, School of Biological Sciences | 19 Chlorine Gardens| Belfast, BT9 5DJ Queen’s University Belfast | +44 28 9097 2383 | https://www.qub.ac.uk/schools/SchoolofBiologicalSciences/ (1)
Experimental Radiation Oncology department, The University of Texas MD Anderson Cancer Center (1)
IMOL Polish Academy of Sciences, Warsaw, Poland (1)
Institute of Biochemistry II, Goethe University, Frankfurt, Germany (1)
International Institute of Molecular and Cell Biology in Warsaw, Poland (1)
Member, St. Jude Faculty / Director, Division of Experimental Hematology / Wall Street Committee Endowed Chair St. Jude Children's Reserch Jospital Memphis, TN 38105 (1)
Oncology Research and Development, Pfizer Inc. (1)
Pacific Northwest National Laboratory (1)
Physiology and Pharmacology McCaig Institute Southern Alberta Mass Spectrometry Core facility University of Calgary (1)
Professor of Biomolecular Chemistry at the University of Wisconsin - Madison (1)
Proteomics Platform, Broad Institute of MIT and Harvard (1)
Senior Researcher - Principal Investigator, Computational and Chemical Biology, Istituto Italiano di Tecnologia Via Morego, 30 16163 Genova - Italy Tel: +39 010 28961 - C.F.: 97329350587 - P.Iva: 09198791007 (1)
Systems Biology Ireland, University College Dublin. (1)
The David and Inez Myers Laboratory of Cancer Genetics, Department of Human Molecular Genetics and Biochemistry, Tel Aviv University School of Medicine, Tel Aviv 69987, Israel. (1)
The Forsyth Institute (1)
The Institute of Cancer Research (1)
The University of Queensland (1)

IsPrivate

False (7)

Classification

viruses (1)

Study type

Transcription profiling by array (57)
RNA-seq of coding RNA (25)
ChIP-seq (15)
ChIP-chip by tiling array (11)
Methylation profiling by array (6)
Comparative genomic hybridization by array (4)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
RNA-seq of coding RNA from single cells (2)
Transcription profiling by tiling array (1)
ATAC-seq (1)
Hi-C (1)
Other (1)
RNA-seq of non coding RNA (1)
Interventional (1)

Release Date

2022 (536)
2021 (492)
2025 (455)
2024 (445)
2023 (431)
2020 (381)
2018 (308)
2019 (289)
2016 (222)
2017 (211)
2015 (192)
2013 (148)
2014 (137)
2012 (119)
2011 (88)
2010 (87)
2026 (65)
2009 (52)
2008 (34)
2006 (20)
2007 (18)
2005 (12)
2004 (11)
2003 (6)
2002 (5)
1997 (3)
1999 (2)
1998 (2)
2001 (1)

Location

Japan (1)
United States (1)

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Transcription profiling of human soluble guanylate cyclase-deficient U937 cells exposed to the nitric oxide (NO) donor S-nitrosoglutathione to provide insight into the cGMP-independent effects of NO

NO effects on gene expression, independent of cGMP, were examined globally. Differentiated human U937 cells that lack soluble guanylate cyclase were exposed to Snitrosoglutathione, a NO donor, or glutathione without or with dibutyryl-cAMP (Bt2cAMP). NO regulated 110 transcripts that annotated dispro...

ORGANISM(S): Homo sapiens

2007-09-11 | E-GEOD-2649 | biostudies-arrayexpress

Data-driven strategies for increasing patient diversity in Bristol Myers Squibb-sponsored US oncology clinical trials.

Not available

S-EPMC10638849 | biostudies-literature

One-STAGE Tip Method for TMT based Proteomic Analysis of Minimal Amount of Cells

LC-MS-based profiling of proteomes with isobaric tag labeling from low-quantity biological and clinical samples, including needle-core biopsies and laser capture microdissection, has been challenging due to limited amount and sample loss during preparation. To address this problem, we developed OnM ...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2023-04-18 | MSV000091734 | MassIVE

WRN is required for ATM activation and the S-phase checkpoint in response to interstrand cross-link-induced DNA double-strand breaks.

Not available

S-EPMC2526706 | biostudies-literature

Lipase Assisted (S)-Ketoprofen Resolution from Commercially Available Racemic Mixture.

Not available

S-EPMC8541352 | biostudies-literature

The human brainome: network analysis identifies HSPA2 as a novel Alzheimer’s disease target.

Not available

S-EPMC6136080 | biostudies-literature

Predicting judging-perceiving of Myers-Briggs Type Indicator (MBTI) in online social forum.

Not available

S-EPMC8234987 | biostudies-literature

SAIL study of stroke, systemic embolism and bleeding outcomes with warfarin anticoagulation in non-valvular atrial fibrillation (S⁴-BOW-AF).

Not available

S-EPMC10153743 | biostudies-literature

Proteomics of Mouse Syngeneic Models

The cell line-derived xenografts and patient derived xenografts have limited use in cancer immunotherapy evaluation because an immune compromised host is required for xenotransplantation. Syngeneic mouse models are derived by transplanting established mouse cell lines or tumor tissues to strain matc...

ORGANISM(S): Mus musculus (Mouse)

2019-12-03 | PXD011885 | Pride

Myosin in autoinhibited off state(s), stabilized by mavacamten, can be recruited via inotropic effectors.

Not available

S-EPMC10120679 | biostudies-literature

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4873 Results

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