Myofiber - OmicsDI

Show results for

Unknown (1043)
Genomics (270)
Transcriptomics (219)
Proteomics (29)
Other (6)
Methylation profiling (2)
Metabolomics (2)

Organisms

Mus musculus (196)
Homo sapiens (37)
Andropogon gerardi (18)
Bacteria (18)
Canis lupus familiaris (18)
Clavibacter nebraskensis NCPPB 2581 (18)
Cnidaria (18)
Ensifer adhaerens (18)
Fasciola (18)
Human alphaherpesvirus 1 strain 17 (18)
Human alphaherpesvirus 1 strain KOS (18)
Human betaherpesvirus 5 (18)
Human herpesvirus 2 strain 186 (18)
Mesocricetus auratus (18)
Miscanthus x giganteus (18)
Mus musculus (18)
Panicum virgatum (18)
Rattus norvegicus (7)
Sus scrofa (4)
Ovis aries (3)
Salmo salar (2)
Drosophila melanogaster (2)
Macaca fascicularis (2)
Bos taurus (1)
Gallus gallus (1)
Mesocricetus auratus (1)
Mus (1)
Oncorhynchus mykiss (1)
Saccharomyces cerevisiae (1)
synthetic construct (1)

Organisms

Mus musculus (157)
Homo sapiens (29)
Sus scrofa (7)
Ovis aries (4)
Rattus norvegicus (3)
Macaca fascicularis (2)
Drosophila melanogaster (2)
Mesocricetus auratus (1)
Mus (1)
Gallus gallus (1)
Salmo salar (1)
pig gut metagenome (1)

Repository

ENA (247)
geo (204)
biostudies-arrayexpress (45)
pride (18)
jPOST (4)
MassIVE (4)
iProX (3)
MetaboLights (2)
NODE (1)

Tissue

Skeletal muscle (7)
Skeletal muscle fiber (3)
Muscle (2)
Tibialis anterior (2)
Early embryonic cell (1)
Embryo (1)
Femoral muscle (1)
Muscle cell (1)
Muscle fibre (1)
Rectus femoris (1)
Skeletal muscle tissue (1)
Smooth muscle (1)
Soleus (1)
Whole body (1)

Disease

Spinal muscular atrophy (NCI Metathesaurus C0026847) has DiseaseStaging postsymptomatic (1)
Normal (1)
Breast cancer (1)
Cachexia (1)
Cardiovascular system disease (1)
Critical illness polyneuropathy (1)
Duchenne muscular dystrophy (1)
Muscular atrophy (1)
Nemaline myopathy (1)

Technology Type

Mass Spectrometry (18)
Shotgun proteomics (9)
Bottom-up proteomics (8)
Data-dependent acquisition (2)
NMR spectroscopy (1)
Mass spectrometry (1)
Mass spectrometry assay (1)
Data-independent acquisition (1)
Mass spectrometry imaging (1)
SWATH MS (1)

Instrument Platform

Illumina HiSeq 4000 (3)
Illumina HiSeq 2500 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Quiagen Mini prep kit (1)
Illumina TruSeq (1)
NextSeq 2000 (1)
Illumina NovaSeq 6000 (1)
NextSeq 500 (1)
LTQ Orbitrap Elite (1)
Orbitrap Fusion Lumos (1)
Q Exactive (1)
TripleTOF 6600 (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2024 (38)
2026 (36)
2025 (31)
2022 (31)
2021 (28)
2019 (16)
2020 (15)
2010 (13)
2023 (13)
2016 (9)
2014 (9)
2012 (9)
2015 (6)
2017 (6)
2013 (4)
2011 (4)
2007 (3)
2018 (3)
2008 (2)
2005 (1)
2006 (1)
2004 (1)
2003 (1)

CHEBI ID

CHEBI:58273 (1)
CHEBI:57865 (1)
CHEBI:37455 (1)
CHEBI:15366 (1)
CHEBI:58115 (1)
CHEBI:35932 (1)
CHEBI:15351 (1)
CHEBI:28757 (1)
CHEBI:42111 (1)
CHEBI:78697 (1)
CHEBI:27266 (1)
CHEBI:18186 (1)
CHEBI:26986 (1)
CHEBI:17822 (1)
CHEBI:26271 (1)
CHEBI:28044 (1)
CHEBI:25094 (1)
CHEBI:78320 (1)
CHEBI:24898 (1)
CHEBI:27570 (1)
CHEBI:18237 (1)
CHEBI:17376 (1)
CHEBI:22660 (1)
CHEBI:22653 (1)
CHEBI:16449 (1)
CHEBI:17234 (1)
CHEBI:30751 (1)
CHEBI:15428 (1)
CHEBI:14314 (1)
CHEBI:20067 (1)

Metabolite Name

Lactic acid (2)
Succinic acid (2)
(-)-Epothilone E (1)
(-)-Isobebeerine (1)
(+)-(E,E)-3-Hydroxy-7-phenyl-4,6-heptadienic acid (1)
(+)-Rauflorine (1)
(+/-)-lefetamine (1)
(¡À)-Camphoric acid (1)
(13S,14S)-epoxymaresin (1)
(1S,2R,5S,6R)-5,6-dihydroxy-2-methylcyclohex-3-enecarboxylic acid|massarigenin E (1)
(2S)-2r,8c,17t-triisobutyl-5c,11c,14t-triisopropyl-7-methyl-1,4,10-trioxa-7,13,16-triaza-cyclooctadecane-3,6,9,12,15,18-hexaone|cyclo-(L-2-hydroxy-3-methyl-butyryl->N-methyl-L-leucyl->L-2-hydroxy-3-methyl-butyryl->D-valyl->D-leucyl->L-2-hydroxy-4-methyl-pentanoyl)|Pimaydolid|pimaydolide (1)
(2S)-methylbutanenitrile (1)
(2S,3R)-2,3-Dihydroxy-5-oxohexanedioate (1)
(2S,3R,4R,5S,6S)-2-(Hydroxymethyl)-6-phenylmethoxyoxane-3,4,5-triol (1)
(2S,3S,4R,5R)-2,5-epoxy-3,4-dimethyl-8,9-methylenedioxy-10-methoxy-6,11-benzocycloheptan-1-one|gymnothedelignan A (1)
(3E,5Z)-1,3,5-Heptatriene (1)
(5R,6E)-5-Hydroxy-1,7-Diphenyl-6-Hepten-3-One (1)
(6S,8S)-5,6,7,8-tetrahydro-1,3,6-trihydroxy-6-acetyl-8-methylnaphthalene-4-carboxylic acid|ficuselastic acid (1)
(E)-10a-(2-(allyloxy)styryl)-10,10-dimethyl-3,4,10,10a-tetrahydropyrimido[1,2-a]indol-2-ol (1)
(E,E,E)-1,7-diphenyl-1,3,5-heptatriene|1,7-diphenylhepta-1,3,5-triene (1)
(plusmn)12,13-DiHOME (1)
(R)-3-Hydroxydodecanoic acid (1)
(S)-2-Propylpiperidine (1)
(S)-alpha-Phellandrene (1)
(Z)-2-Methyl-2-buttersaeure-(2-hydroperoxy-2-methyl-3-butenyl)ester (1)
[(2R,5R)-5-(2-Amino-6-oxo-1H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate (1)
1-(4-oxo-4h-chromen-3-yl)-2,3,4,9-tetrahydro-1h-beta-carboline-3-carboxylic acid (1)
1,1-Diphenylurea (1)
1,1'-OXYBIS(4-ISOCYANATOBENZENE) (1)
1,2,4-trithiolane 4-oxide (1)

First Public Date

2024 (43)
2026 (33)
2025 (32)
2021 (29)
2022 (28)
2019 (20)
2014 (17)
2023 (16)
2020 (14)
2017 (4)
2015 (4)
2018 (3)
2016 (2)
2013 (2)

Study type

Transcription profiling by array (35)
RNA-seq of coding RNA (6)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)

Release Date

2022 (122)
2023 (116)
2025 (111)
2020 (101)
2021 (99)
2024 (90)
2019 (65)
2017 (55)
2018 (52)
2016 (47)
2014 (36)
2015 (35)
2013 (24)
2012 (24)
2010 (22)
2026 (20)
2011 (20)
2007 (12)
2009 (12)
2008 (10)
2006 (7)
2005 (3)
2004 (2)
2002 (1)
2001 (1)
1998 (1)

Lab affiliation

Biological Mass Spectrometry Lab Department of Translational Medicine (DiMeT) Center for Translational Research on Autoimmune & Allergic Diseases - CAAD University of Piemonte Orientale Corso Trieste 15/A, 28100, Novara, Italy (1)
Biozentrum, University of Basel, Switzerland (1)
Clinical Proteomics Group, University of Oxford, United Kingdom (1)
Department of Anatomy and Embryology, Leiden University Medical Center, 2333 Leiden, the Netherlands The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), Leiden node, The Netherlands (1)
Department of Biochemistry&Molecular Biology, SUNY Upstate Medical University, Syracuse, NY, USA (1)
Department of Biomedical Sciences for Health, University of Milan, 20133 Milan, Italy (1)
Department of Biomedical Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark (1)
Department of Developmental Neurobiology St. Jude Children's Research Hospital (1)
Hospital of the University of Pennsylvania 3400 Civic Center Boulevard, South Pavilion, 11-176 Philadelphia, PA 19104 (1)
IUSM Center for Proteome Analysis, Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN (1)
Leibniz Institute on Aging, Fritz Lipmann Institute, Beutenbergstrasse 11, 07745 Jena, Germany (1)
Novo Nordisk Foundation Center for Basic Metabolic Research University of Copenhagen, Denmark (1)
Professor of Surgery Marian J. Morrison Chair in Breast Cancer Research Associate Director of Education, IU Simon Cancer Center Co-Director, IU Simon Cancer Center Breast Cancer Program Department of Surgery, Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN 46202, USA Richard L Roudebush VA Medical Center, Indianapolis, IN 46202, USA C218C, 980 West Walnut St. Indianapolis, IN 46202, USA 317 278 2238 (1)
Proteomics Core Facilities Biogenouest IRSET Inserm U1085 France (1)
Research institute for sport and exercise sciences, Liverpool John Moores University (1)
State Key Laboratory of Biocontrol, Sun Yat-sen University, Guangzhou 510006, Guangdong, China, (1)
University of Missouri Kansas City School of Science and Engineering Division of Biological & Biomedical Systems Spencer Building, 505B 5009 Rockhill Rd. Kansas City, MO 64110-2239 (1)

Previous page
1 / 158
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 158
Next page

Sort by:

Relevance

Page size

Integrated single cell functional-proteomic profiling of human skeletal muscle reveals a shift in cellular specificity in nemaline myopathy

Skeletal muscle is a complex syncytial arrangement of an array of cell types and, in the case of muscle specific cells (myofibers), sub-types. There exists extensive heterogeneity in skeletal muscle functional behaviour and molecular landscape, at the cell composition, myofiber sub-type and intra-my...

ORGANISM(S): Homo sapiens (Human)

2025-06-09 | PXD061287 | Pride

The myokine Fibcd1 is an endogenous determinant of myofiber size and mitigates cancer-induced myofiber atrophy

PRJNA659071 | ENA

The myokine Fibcd1 is an endogenous determinant of myofiber size and mitigates cancer-induced myofiber atrophy

PRJNA762087 | ENA

Spatial protein expression pattern across pathologically affected myofibers revealed molecular specialization in inclusion body myositis

Skeletal muscle is primarily composed of myofibers responsible for contraction. In muscular diseases, these fibers undergo structural and functional changes, often marked by increased regeneration, atrophy and fibrosis. These features are also found in Inclusion Body Myositis (IBM)—a progressive myo...

ORGANISM(S): Homo sapiens (Human)

2026-09-14 | PXD069042 | Pride

Human Muscle Spatial proteomics Lc-ms Myofiber

The myokine Fibcd1 is an endogenous determinant of myofiber size and mitigates cancer-induced myofiber atrophy

PRJNA665713 | ENA

Caloric restriction rejuvenates myofiber growth in heart failure

PRJEB59097 | ENA

Loss of G9a in myofiber accelerates muscle regeneration

PRJNA1274901 | ENA

Single myofiber RNA-seq of young and old mice

PRJNA576473 | ENA

Caloric restriction rejuvenates myofiber growth in heart failure

Heart failure with preserved ejection fraction (HFpEF) is characterised by a distinct but poorly understood in skeletal muscle pathology. In a rat model ZSF1, we identify impaired myonuclear accretion as a mechanism for ablated myofiber growth in HFpEF following resistance exercise intervention. Mus...

ORGANISM(S): Rattus norvegicus

2025-01-19 | E-MTAB-12494 | biostudies-arrayexpress

The myokine Fibcd1 is an endogenous determinant of myofiber size and mitigates cancer-induced myofiber atrophy.

Not available

S-EPMC9061726 | biostudies-literature

Previous page
1 / 158
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 158
Next page

Sort by:

Relevance

Page size

1571 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets