Neural progenitors cells

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Unknown (1559)
Genomics (879)
Transcriptomics (809)
Proteomics (46)
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Methylation profiling (12)
Metabolomics (2)
Genomic (1)

Organisms

Mus musculus (511)
Homo sapiens (436)
Danio rerio (34)
Gallus gallus (20)
Rattus norvegicus (16)
Xenopus laevis (9)
Drosophila melanogaster (9)
Macaca mulatta (4)
Pan troglodytes (3)
Schmidtea mediterranea (2)
Macaca fascicularis (2)
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mixed sample (1)
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Aedes aegypti (1)
Ambystoma mexicanum (1)
Macaca fuscata (1)
Mustela putorius furo (1)
Nothobranchius furzeri (1)
synthetic construct (1)
Oropouche virus (1)

Organisms

Mus musculus (298)
Homo sapiens (292)
Danio rerio (27)
Gallus gallus (12)
Drosophila melanogaster (10)
Rattus norvegicus (6)
Xenopus laevis (4)
Xenopus tropicalis (2)
Macaca mulatta (2)
Macaca fuscata (1)
Mustela putorius furo (1)
Ambystoma mexicanum (1)
Coturnix japonica (1)
Macaca fascicularis (1)
Schmidtea mediterranea (1)

Repository

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geo (558)
biostudies-arrayexpress (428)
pride (38)
EGA (7)
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iProX (2)
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dbGaP (1)
jPOST (1)

Tissue

Cell culture (15)
Brain (8)
Stem cell (8)
Embryonic stem cell (5)
Neuronal stem cell (5)
Cell suspension culture (3)
Embryo (2)
Epithelial cell (2)
Neural cell (2)
Basal forebrain (1)
Early embryonic cell (1)
HiPSC cell (1)
Multipotent stem cell (1)
Neural progenitor cell (1)
Neuroblast (1)
Primary cell (1)
Retina (1)
Whole body (1)

Disease

Normal (3)
Glioblastoma multiforme (2)
Breast cancer (2)
Schizophrenia (2)
Myeloid neoplasm (1)
Acute Myeloid Leukemia (1)
Astrocytoma III (1)
Leigh disease (1)
Mixed disorder as reaction to stress (1)
Neuroblastoma (1)
Parkinson's disease (1)
Retinal degeneration (1)

Technology Type

Mass Spectrometry (38)
Shotgun proteomics (20)
Bottom-up proteomics (7)
Data-independent acquisition (7)
Data-dependent acquisition (4)
SWATH MS (3)
HDMSE (2)
Top-down proteomics (2)
NextSeq 500, Illumina HiSeq 2500, AB 5500xl Genetic Analyzer, ILLUMINA (1)
Mass spectrometry (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
DiaPASEF (1)

Instrument Platform

Illumina NovaSeq 6000 (27)
Illumina HiSeq 2500 (12)
NextSeq 500 (11)
Illumina HiSeq 2000 (8)
Illumina HiSeq 4000 (7)
Linux computer (3)
Linux Beowulf cluster; AMD Opteron Linux Beowulf cluster; AMD Opteron 6168 (2)
Illumina Genome Analyzer IIx (2)
Illumina NOVAseq 6000 (1)
Chromium Controller, 10x Genomics and Chromium X, 10x Genomics (1)
Chromium Controller, 10x Genomics and Chromium X, 10x Genomics (1)
Cell culture (1)
BD Rhapsody (1)
Bioanalyzer 2200 (1)
Chromium Controller (1)
Qubit instrument, DNA HS kit (1)
High Sensitivity DNA kit (1)
BioRad SureCell (1)
Microcentrifuge (1)
FACSAria Fusion (1)
Linux Beowulf cluster (1)
Fluidigm C1 (1)
Unspecified (1)
ScanArray scanning hardware (1)
Illumina Genome Analyzer II (1)
Affymetrix Fluidics Station 400 (1)
NA (1)
NextSeq 2000 (1)
DNBSEQ-G400 (1)
Illumina HiSeq 1000 (1)

Publication Date

2015 (91)
2025 (88)
2014 (70)
2026 (68)
2022 (68)
2023 (66)
2016 (66)
2013 (64)
2021 (53)
2020 (51)
2019 (50)
2010 (48)
2024 (46)
2017 (40)
2011 (37)
2018 (36)
2012 (32)
2009 (20)
2008 (20)
2007 (9)
2005 (6)
2006 (5)
2004 (1)

CHEBI ID

CHEBI:14314 (1)
CHEBI:15356 (1)
CHEBI:15428 (1)
CHEBI:15699 (1)
CHEBI:15741 (1)
CHEBI:15746 (1)
CHEBI:15891 (1)
CHEBI:15971 (1)
CHEBI:16000 (1)
CHEBI:16040 (1)
CHEBI:16113 (1)
CHEBI:16235 (1)
CHEBI:16335 (1)
CHEBI:16449 (1)
CHEBI:16467 (1)
CHEBI:16610 (1)
CHEBI:16811 (1)
CHEBI:16865 (1)
CHEBI:16958 (1)
CHEBI:17016 (1)
CHEBI:17053 (1)
CHEBI:17148 (1)
CHEBI:17201 (1)
CHEBI:17234 (1)
CHEBI:17268 (1)
CHEBI:17553 (1)
CHEBI:17780 (1)
CHEBI:17821 (1)
CHEBI:17822 (1)
CHEBI:17964 (1)

Metabolite Name

Alpha ketoglutaric acid (1)
Citric acid (1)
Fumaric acid (1)
Gamma-aminobutyric acid (1)
Glucose (1)
Glutamic acid (1)
Glyceric acid (1)
L-2-aminoadipic acid (1)
L-alpha-aminobutyric acid (1)
L-aspartic acid (1)
Lactic acid (1)
Malic acid (1)
Pipecolic acid (1)
Pyruvic acid (1)
Succinic acid (1)

First Public Date

2025 (100)
2023 (79)
2024 (69)
2022 (68)
2026 (63)
2014 (61)
2021 (58)
2019 (44)
2020 (41)
2017 (41)
2015 (36)
2018 (33)
2016 (30)
2013 (11)

Study type

Transcription profiling by array (226)
RNA-seq of coding RNA (77)
ChIP-seq (37)
RNA-seq of coding RNA from single cells (28)
Methylation profiling by array (8)
Other (7)
Methylation profiling by high throughput sequencing (6)
Unknown experiment type (5)
Single nucleus RNA sequencing (4)
RNA-seq of non coding RNA (4)
Comparative genomic hybridization by array (3)
Transcription profiling by SAGE (2)
Cell line - Single-cell sequencing (2)
Animal - One-color microarray (2)
Human - Single-cell sequencing (2)
Transcription profiling by RT-PCR (2)
MicroRNA profiling by array (2)
RNA-seq of total RNA (2)
Baseline (1)
ChIP-chip by tiling array (1)
Animal - Single-cell sequencing (1)
Cell line - High-throughput sequencing (1)
ChIP-chip by array (1)
ATAC-seq (1)
ScATAC-seq (1)
DNA-seq (1)

Release Date

2015 (149)
2022 (141)
2014 (137)
2021 (127)
2016 (126)
2023 (120)
2020 (117)
2025 (113)
2019 (112)
2018 (111)
2013 (110)
2011 (94)
2017 (90)
2024 (87)
2012 (83)
2010 (83)
2009 (49)
2008 (45)
2007 (28)
2026 (23)
2006 (13)
2005 (11)
2004 (8)
2003 (4)
2002 (2)
2001 (1)
2000 (1)
1998 (1)

Lab affiliation

CCBIO, Department of Clinical Medicine, Faculty of Medicine, University of Bergen, Bergen, Norway (2)
CECAD Cluster of Excellence, University of Cologne (2)
Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran (2)
Lab of Neuroproteomics, Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, SP, Brazil (2)
CNC-Center for Neuroscience and Cell Biology, University of Coimbra, 3004-517 Coimbra, Portugal; Biocant, Biotechnology Innovation Center, 3060-197 Cantanhede, Portugal (1)
Cedars-Sinai Medical Center (1)
Center for Organismal Studies (COS) Heidelberg, University of Heidelberg (Germany) (1)
Centre for Cancer Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London. EC1M6BQ, London, UK (1)
Cologne Excellence Cluster for Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph Stelzmann Strasse 26, 50931 Cologne, Germany. (1)
Department of Biomedical Sciences, University of Copenhagen, Denmark (1)
Department of Cardiology, Smidt Heart Institute and Proteomics and Metabolomics Core Facility (1)
Developmental Dynamics Lab, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT (1)
EDyP (1)
Experimental and Clinical Research Center, a cooperation between Max Delbrück Center for Molecular Medicine in the Helmholtz Association and Charité Universitätsmedizin Berlin, Berlin, Germany. Humboldt-Universität zu Berlin, Faculty of Life Sciences Berlin, Germany Berlin Institute of Health (BIH), Center for Regenerative Therapies, Berlin, Germany (1)
Fondazione Pisana per la Scienza, ONLUS, San Giuliano Terme, Pisa, Italy (1)
IMBA – Institute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna, Austria (1)
Institute for Anatomy and Cell Biology Dept. Molecular Embryology Albert-Ludwigs-University Freiburg Germany (1)
Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology - Hellas (FORTH), 100, Plastira Str., 70013 Heraklion, Crete, Greece. (1)
Lab of Neuroproteomics, Institute of Biology, Department of Biochemistry and Tissue Biology, University of Campinas (UNICAMP), Campinas, Brazil. (1)
Laboratoire PRISM INSERM U1192 Universite de Lille France (1)
Laboratory of Developmental Genetics, Department of Molecular Biology and ULB Neuroscience Institute (UNI), Université Libre de Bruxelles, Gosselies 6041, Belgium. (1)
Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. (1)
Lund Stem Cell Center, Division of Molecular Hematology, Lund University, Lund, Sweden (1)
Max Delbrueck Center for Molecular Medicine (MDC), Berlin, Germany (1)
Max Planck Institute of Psychiatry Kraepelinstrasse 2 80804 Munich Germany (1)
Neurovirology group, Wuhan institute of Virology, Chinese Academy of Sciences (1)
Professor of Systems Pharmacology Head of Harvard Program in Therapeutic Science Harvard Medical School (1)
Proteomics Core Facility, University of Gothenburg, Sweden (1)
Proteomics Unit, Institute of Chemistry, Federal University of Rio de Janeiro (UFRJ), Rio deJaneiro, Brazil. Precision Medicine Research Center, Institute of Biophysics Carlos Chagas Filho, Federal University of Rio de Janeiro (UFRJ), Rio de Janeiro, Brazil. (1)
University of Lausanne, Department of Biomedical Sciences, Rue du Bugnon 7, 1005 Lausanne (1)

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Proteomic signatures of schizophrenia-sourced iPSC-derived neural progenitors and neurons

Schizophrenia is a complex and severe neuropsychiatric disorder, with a wide range of debilitating symptoms. Several aspects of its multifactorial complexity are still unknown, and some are accepted to be an early developmental deficiency with a more specifically neurodevelopmental origin. Understan...

ORGANISM(S): Homo sapiens (Human)

2023-03-11 | PXD026593 | Pride

mRNAseq analysis of Nkx2.2, Nkx6.1, and Olig2 overexpression in neural progenitors

Nkx2.2, Nkx6.1, and Olig2 repressors were overexpressed, singly or in combination, in in vitro-derived mouse neural progenitors to identify thier repression targets Overexpression study to identify genes repressed by Nkx2.2, Nkx6.1, and Olig2 in neural progenitors

ORGANISM(S): Mus musculus

2015-08-24 | E-GEOD-65457 | biostudies-arrayexpress

Sox2 ChIP-seq in hindbrain and spinal cord neural progenitors differentiated from mouse embryonic stem cells

Sox2 is a key determinant of neural cell identity, expressed in neural progenitors from anterior to posterior levels. We asked if the occupancy of this factor changes in neural progenitors with different axial identities. To this end, we performed the directed differentiation of mouse embryonic stem...

ORGANISM(S): Mus musculus

2018-08-27 | E-MTAB-6348 | biostudies-arrayexpress

Prospective Identification, Isolation, and Profiling of a Telomerase-Expressing Subpopulation of Human Neural Stem Cells, using sox2 Enhancer-Directed Fluorescence-Activated Cell Sorting

Sox2 is expressed by neural stem and progenitor cells, and a sox2 enhancer identifies these cells in the forebrains of both fetal and adult transgenic mouse reporters. We found that an adenovirus encoding EGFP placed under the regulatory control of a 0.4 kb sox2 core enhancer selectively identified ...

ORGANISM(S): Homo sapiens

2011-02-25 | E-GEOD-27505 | biostudies-arrayexpress

Transcription profiling of human embryonic stem cells during differentiation to more restricted neural progenitors

The purpose of this study was to examine global gene expression during the differentiation of human embryonic stem cells to more restricted neural progenitors. We developed an adherent differentiation protocol with completely defined media that produced 2 distinct classes of neuroepithelia based on...

ORGANISM(S): Homo sapiens

2007-03-09 | E-SMDB-3806 | biostudies-arrayexpress

Transcription profiling of mouse embryonic stem cells in vitro - FunGenES: IMM-1: Neural Differentiation of Embryonic Stem Cells in vitro: a Road Map to Neurogenesis in the Embryo

This experiment is part of the FunGenES project (FunGenES - "Functional Genomics in Embryonic Stem Cells" partially funded by the 6th Framework Programme of the European Union, http://www.fungenes.org). The experiment was conducted at the "Instituto de Medicina Molecular,Faculdade de Medicina de Lis...

ORGANISM(S): Mus musculus

2009-07-23 | E-TABM-717 | biostudies-arrayexpress

Defining a developmental path to neural fate by global expression profiling of mouse ESCs and adult NS cells

Defining a developmental path to neural fate by global expression profiling of mouse embryonic stem cells and adult neural stem/progenitor cells. This SuperSeries is composed of the following subset Series: GSE4075: Neural induction (Embrioid bodies-Retinoic acid) GSE4076: Neural induction (N2B27 m...

ORGANISM(S): Mus musculus

2010-06-11 | E-GEOD-4082 | biostudies-arrayexpress

ES, EC, NS, TS, Placenta and Neural induction (N2B27) comaprison

Comparison among ES, EC, TS, NS, differentiated neural cells derived from NS and placenta in addition to ES-N2B27 neural induction. Comparison among ES, EC, TS, NS, differentiated neural cells derived from NS and placenta in addition to ES-N2B27 neural induction.

ORGANISM(S): Mus musculus

2010-06-11 | E-GEOD-4077 | biostudies-arrayexpress

Transcription profiling of neural stem cells treated with FGF-2, PDGF-AA or in the absence of growth factor (differentiation)

We compared the gene expression profiles of neural stem cells treated with FGF-2, PDGF-AA or in the absence of growth factor (differentiation). Cells grown in the presence of FGF-2 were used as a reference.

ORGANISM(S): Rattus norvegicus

2006-03-15 | E-TABM-39 | biostudies-arrayexpress

Embryonic and adult neural crest stem cells

Cells were isolated from mouse embryonic neural crest stem cells at culture day 2 (NCSC), from day 7 in vitro differentiated progeny (NCP) and day 2 epidermal neural crest stem cells from bulge explants of adult whisker follicles (EPI-NCSC). Keywords: LongSAGE embryonic neural crest stem cells at cu...

ORGANISM(S): Mus musculus

2006-04-18 | E-GEOD-4680 | biostudies-arrayexpress

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