Nicholas Michael M

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Genomics (133)
Unknown (56)
Transcriptomics (36)
Proteomics (17)
Metabolomics (4)
Genomic (1)

Organisms

Homo sapiens (160)
Mus musculus (9)
Clostridium botulinum (1)
Salmonella enterica (1)
Blumeria graminis (1)
Ovis aries (1)
Bos taurus (1)
Gallus gallus (1)
Pyricularia oryzae (1)

Organisms

Severe acute respiratory syndrome coronavirus 2 (1)

Repository

EGA (131)
biostudies-arrayexpress (37)
MassIVE (7)
PanoramaPublic (6)
MetaboLights (3)
PAXDB (2)
pride (2)
dbGaP (1)
GNPS (1)
ENA (1)

Tissue

Epithelial cell (1)

Disease

Papillary renal cell carcinoma (1)
Glioma (1)
Alpha-1 antitrypsin deficiency (1)

Technology Type

Illumina 15K (8)
Mass spectrometry (2)
Mass Spectrometry (2)
Shotgun proteomics (2)
Affymetrix 6.0, Illumina_670k - Illuminus, Illumina 1.2M (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, ILLUMINA, Illumina HiSeq 2500 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
Illumina_670k - Illuminus, Affymetrix 6.0, Illumina 1.2M (1)
NMR spectroscopy (1)

Instrument Platform

Orbitrap Fusion (3)
Orbitrap Fusion Lumos (2)
Q Exactive GC-MS Orbitrap (Thermo Scientific) (2)
Q Exactive HF (2)
Q Exactive (2)
LTQ Orbitrap Velos (1)
TripleTOF 6600 (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2014 (8)
2010 (6)
2021 (6)
2015 (5)
2007 (5)
2013 (4)
2012 (3)
2011 (3)
2022 (3)
2016 (2)
2023 (2)
2020 (2)
2009 (1)
2008 (1)
2005 (1)
2019 (1)
2018 (1)

UNIPROT ID/AC

10116.ENSRNOP00000001467 (2)
10116.ENSRNOP00000004127 (2)
10116.ENSRNOP00000007070 (2)
10116.ENSRNOP00000007645 (2)
10116.ENSRNOP00000010798 (2)
10116.ENSRNOP00000019755 (2)
10116.ENSRNOP00000028732 (2)
10116.ENSRNOP00000031360 (2)
10116.ENSRNOP00000050143 (2)
10116.ENSRNOP00000052803 (2)
10116.ENSRNOP00000054637 (2)
10116.ENSRNOP00000059667 (2)
10116.ENSRNOP00000060017 (2)
10116.ENSRNOP00000061650 (2)
10116.ENSRNOP00000064401 (2)
10116.ENSRNOP00000064646 (2)
10116.ENSRNOP00000065372 (2)
10116.ENSRNOP00000065625 (2)
10116.ENSRNOP00000065704 (2)
10116.ENSRNOP00000066126 (2)
10116.ENSRNOP00000066155 (2)
10116.ENSRNOP00000066428 (2)
10116.ENSRNOP00000067288 (2)
10116.ENSRNOP00000067711 (2)
1433B_RAT (2)
1433E_RAT (2)
1433F_RAT (2)
1433G_RAT (2)
1433T_RAT (2)
1433Z_RAT (2)

CHEBI ID

CHEBI:15428 (3)
CHEBI:15741 (3)
CHEBI:30768 (3)
CHEBI:15355 (2)
CHEBI:15366 (2)
CHEBI:15882 (2)
CHEBI:15887 (2)
CHEBI:15891 (2)
CHEBI:16359 (2)
CHEBI:16449 (2)
CHEBI:16525 (2)
CHEBI:16811 (2)
CHEBI:16919 (2)
CHEBI:17268 (2)
CHEBI:17368 (2)
CHEBI:17418 (2)
CHEBI:17568 (2)
CHEBI:18012 (2)
CHEBI:18132 (2)
CHEBI:18186 (2)
CHEBI:18237 (2)
CHEBI:22660 (2)
CHEBI:24898 (2)
CHEBI:25017 (2)
CHEBI:25094 (2)
CHEBI:26271 (2)
CHEBI:26986 (2)
CHEBI:27266 (2)
CHEBI:27471 (2)
CHEBI:27897 (2)

Metabolite Name

Creatine (2)
Fumarate (2)
Glycine (2)
Hypoxanthine (2)
Myo-Inositol (2)
Pyruvate (2)
Succinate (2)
Taurine (2)
Uracil (2)
(+)-15-nor-4-thujopsen-3-one (1)
(+)-Adlumine (1)
(+)-gamma-Hydroxy-L-homoarginine (1)
(+/-)-5-[(tert-Butylamino)-2'-hydroxypropoxy]-1,2,3,4-tetrahydro-1- naphthol (1)
(-)-2-((3,5-Dihydroxy-4-methoxyphenyl)methyl)-2,4,6-trihydroxy-3(2H)-benzofuranone (1)
(1-Ribosylimidazole)-4-acetate (1)
(25R)-3alpha,7alpha-dihydroxy-5beta-cholestan-27-oyl taurine (1)
(2R,3S)-3-Isopropylmalate (1)
(2S)-2-Isopropylmalate (1)
(2S)-2-{[1-(R)-Carboxyethyl]amino}pentanoate (1)
(3'-sulfo)Galbeta-Cer(d18:0/2-OH-20:0) (1)
(3'-sulfo)Galbeta-Cer(d18:0/2-OH-24:1(15Z)) (1)
(3R)-beta-Leucine (1)
(5Z,7E)-9,10-seco-5,7,10(19)-cholestatriene (1)
(9Z)-Hexadecenoic acid (1)
(9Z)-Tetradecenoic acid (1)
(R)-2-Hydroxyglutarate (1)
(R)-3-((R)-3-Hydroxybutanoyloxy)butanoate (1)
(R)-Lactate (1)
(S)-1-Pyrroline-5-carboxylate (1)
(S)-2-Aceto-2-hydroxybutanoate (1)

First Public Date

2021 (1)

Classification

viruses (1)

Study type

Transcription profiling by array (17)
RNA-seq of coding RNA (8)
Comparative genomic hybridization by array (4)
ChIP-chip by tiling array (3)
Unknown experiment type (1)
CLIP-Seq (1)
RNAi profiling by array (1)
ChIP-seq (1)
Methylation profiling by array (1)

Release Date

2014 (12)
2018 (8)
2025 (7)
2021 (7)
2013 (6)
2010 (6)
2022 (6)
2007 (5)
2024 (5)
2023 (5)
2016 (4)
2015 (4)
2012 (4)
2011 (4)
2020 (4)
2019 (2)
2009 (1)
2008 (1)
2005 (1)
2026 (1)

Lab affiliation

Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA. (1)
Mork Family Dept. of Chemical Engineering and Material Science, Associate Prof. (1)

Tags

covid19 (1)
pathogen:virus (1)
pathogen (1)

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Transcription profiling of mouse hippocampus after maternal treatment with saline or 20 mg/kg cocaine twice daily on gestational days 8-19

We explored the hypothesis that maternal cocaine exposure could alter the fetal epigenetic machinery sufficiently to cause lasting neurochemical and functional changes in the offspring. These data were used as preliminary results for paper:; Maternal cocaine administration in mice alters DNA methy...

ORGANISM(S): Mus musculus

2008-06-15 | E-GEOD-6651 | biostudies-arrayexpress

Transcription profiling of human immunoglobulin mutation genotype in B Cell chronic lymphocytic leukaemia

The Journal of Experimental Medicine, Volume 194, Number 11, December 3, 2001 1639-1648 Relation of Gene Expression Phenotype to Immunoglobulin Mutation Genotype in B Cell Chronic Lymphocytic Leukemia Andreas Rosenwald1, Ash A. Alizadeh2, George Widhopf5, Richard Simon6, R. Eric Davis1, Xin Yu1, ...

ORGANISM(S): Homo sapiens

2005-06-29 | E-SMDB-1002 | biostudies-arrayexpress

Capecitabine and oxaliplatin in the preoperative multimodality treatment of rectal cancer: surgical end points from National Surgical Adjuvant Breast and Bowel Project trial R-04.

Not available

S-EPMC4050205 | biostudies-literature

Randomized, double-blind, placebo-controlled phase III trial comparing docetaxel and prednisone with or without bevacizumab in men with metastatic castration-resistant prostate cancer: CALGB 90401.

Not available

S-EPMC3383121 | biostudies-literature

Oxaliplatin as adjuvant therapy for colon cancer: updated results of NSABP C-07 trial, including survival and subset analyses.

Not available

S-EPMC3188282 | biostudies-literature

#COVIDisAirborne: AI-Enabled Multiscale Computational Microscopy of Delta SARS-CoV-2 in a Respiratory Aerosol.

Not available

S-EPMC8609898 | biostudies-literature

Severe acute respiratory syndrome coronavirus 2

Genomic epidemiology of SARS-CoV-2 in a UK university to identify dynamics of transmission

PRJNA779279 | ENA

Per- and Polyfluoroalkyl Substances in Dust Collected from Residential Homes and Fire Stations in North America.

Not available

S-EPMC7939574 | biostudies-literature

AKT but not MYC promotes reactive oxygen species-mediated cell death in oxidative culture

In addition to driving tumorigenesis, oncogenes can create metabolic vulnerabilities in cancer cells. Here, we tested how the oncogenes AKT and MYC affect the ability to shift between respiration and glycolysis. Using immortalized mammary epithelial cellsMCF10A, we discovered constitutively active A...

ORGANISM(S): Homo sapiens (Human)

2020-03-19 | PXD015122 | Pride

An assessment of cultural values and resident-centered culture change in U.S. nursing facilities.

Not available

S-EPMC3567244 | biostudies-literature

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247 Results

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