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ProteomicsTouch-induced phosphoproteome in Arabidopsis thaliana (Q Exactive)
Touch-induced change in protein phosphorylation was studied using Arabidopsis seedlings.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-28 | PXD006181 | Pride
Arabidopsis thaliana Touch Protein phosphorylation Lc-ms/ms 
ProteomicsProteomic response of rat hippocampus under chronic unpredicted mild stress reveals insights into susceptibility and insensitivity to depression
We used a chronic unpredicted mild stress (CUMS) protocol to separate depression-susceptible and stress-insensitive rat subgroups. Differential proteomes in the hippocampus were analyzed based on isobaric tags for relative and absolute quantitation (iTRAQ) labeling combined with mass spectrometry.
ORGANISM(S): Rattus norvegicus (Rat) 
2022-02-17 | PXD025773 | Pride
Hippocampus Depression Chronic unpredicted mild stress Proteome 
UnknownHigh-Contrast Gratings based Spoof Surface Plasmons.
Not available
S-EPMC4754736 | biostudies-literature
ProteomicsTouch-induced phosphoproteome in Arabidopsis thaliana (XL)
Touch-induced change in protein phosphorylation was studied using Arabidopsis seedlings.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-11-08 | PXD006180 | Pride
Arabidopsis thaliana Touch Protein phosphorylation Lc-ms/ms 
ProteomicsDeeply mining a universe of peptides Encoded by Long Noncoding RNAs
Long non-coding RNAs (lncRNAs) are generally defined as RNA transcripts longer than 200 nucleotides that are not translated into proteins. Recently, many small open reading frames (smORFs) embedded in lncRNA scripts have been verified to be able to encode functional polypeptides (namely lncRNA-SEPs ...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2023-05-06 | PXD016981 | Pride
Lncrna Mass spectrometry Smorf Enrichment Seps 
ProteomicsTranscription factor-SNP interactome for colorectal cancer risk loci
A core task to understand the consequences of non-coding single nucleotide polymorphisms (SNP) is to identify their genotype specific binding of transcription factor (TF). Here, we generate a large-scale TF-SNP interaction map for a selection of 116 colorectal cancer (CRC) risk loci and validated TF...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-03-30 | MSV000080810 | MassIVE
TranscriptomicsHuman transcriptome expression analysis of cervical cancer
Although many protein-coding genes have been identified to be aberrantly expressed in cervical cancer, the mechanisms of development and progression of cervical cancer remain unclear. In recent years, non-coding RNAs, especially including microRNAs and long non-coding RNAs, have been shown to play i...
ORGANISM(S): Homo sapiens 
2014-10-27 | E-GEOD-55940 | biostudies-arrayexpress
UnknownArgon Mitigates Impaired Wound Healing Process and Enhances Wound Healing In Vitro and In Vivo.
Not available
S-EPMC6376177 | biostudies-literature
TranscriptomicsDevelopment of gene expression signatures in testis for plin1-null mice
We have employed whole genome microarray expression profiling as a discovery platform to identify the effect of plin1 on gene expression during testis development. Testis of day 21, day 40, and day 60 in plin1-null mice and wild type mice were analyzed. Expression of a list genes (including cyp51, p...
ORGANISM(S): Mus musculus 
2013-03-26 | E-GEOD-39769 | biostudies-arrayexpress
UnknownKRN5b regulates maize kernel row number through mediating phosphoinositol signalling.
Not available
S-EPMC11606425 | biostudies-literature
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