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TranscriptomicsIdentification of genes expressed in C. elegans touch receptor neurons
By culturing and isolating wild-type and mec-3 mutant cells from embryos and applying their amplified RNA to DNA microarrays, here we have identified genes that are known to be expressed in touch receptors, a previously uncloned gene (mec-17) that is needed for maintaining touch receptor differentia...
ORGANISM(S): Caenorhabditis elegans 
2005-08-13 | E-GEOD-3121 | biostudies-arrayexpress
TranscriptomicsThe star-nosed mole reveals clues to the molecular basis of mammalian touch.
Little is known about the molecular mechanisms underlying mammalian touch transduction. To identify novel candidate transducers, we examined the molecular and cellular basis of touch in one of the most sensitive tactile organs in the animal kingdom, the star of the star-nosed mole. Our findings demo...
ORGANISM(S): Mus musculus 
2013-05-31 | E-GEOD-47480 | biostudies-arrayexpress
TranscriptomicsTime course RNA-seq profiling of touch response in Brachypodium distachyon
These datasets contain the RNA sequences of three kinds of sample replicate groups obtained from our experiment: the wild type (WT), SZOE, and szAR. They were taken in the time interval of 0, 10, 30 and 60 minutes. With these RNA sequences, we are profiling the touch response in Bradypodium distachy...
ORGANISM(S): Brachypodium distachyon 
2021-02-28 | E-MTAB-10084 | biostudies-arrayexpress
ProteomicsTouch-induced phosphoproteome in Arabidopsis thaliana (XL)
Touch-induced change in protein phosphorylation was studied using Arabidopsis seedlings.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-11-08 | PXD006180 | Pride
Arabidopsis thaliana Touch Protein phosphorylation Lc-ms/ms 
ProteomicsTouch-induced phosphoproteome in Arabidopsis thaliana (Q Exactive)
Touch-induced change in protein phosphorylation was studied using Arabidopsis seedlings.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-28 | PXD006181 | Pride
Arabidopsis thaliana Touch Protein phosphorylation Lc-ms/ms 
TranscriptomicsRNAseq of wild type Col-0 Arabidopsis plants and piezo/feronia/camta3 mutants before and 22 minutes after touch treatment
RNAseq of wild type Col-0 Arabidopsis plants and piezo/feronia/camta3 mutants before and 22 minutes after touch treatment with a gentle paint brush. The mutants were defective in genes involved in mechanosensing and downstream signalling. Their contribution to touch-responsive signalling was assesse...
ORGANISM(S): Arabidopsis thaliana 
2022-08-21 | E-MTAB-10920 | biostudies-arrayexpress
ProteomicsA MYC2, MYC3, MYC4-dependent transcription factor network regulates touch responses in plants
Plants are continuously exposed to environmental triggers, including mechanical stimulation. Our results demonstrate that jasmonic acid (JA)-signalling plays a key role in very early gene expression changes, well before it leads to touch-induced developmental changes. We show that the JA-activated t...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-29 | PXD014008 | Pride
Touch respose Arabidopsis Myc2 
TranscriptomicsPurified touch receptor neurons: expanded polyGlutamine versus control
Transcriptional profiling of C.elegans purified touch receptor neuron precursors, comparing cells expressing mutant Huntingtin N-terminal fragment to normal Huntingtin N-terminal fragment, both fused to GFP under mec-3 promoter. As a control the same experiment has been done with comparing cell expr...
ORGANISM(S): Caenorhabditis elegans 
2015-02-01 | E-GEOD-35939 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA-sequencing of Gli1-positive cells from different compartments of the adult mouse epidermis
Tomato-traced single cells from the interfollicular epidermis including the touch dome (Gli1-Tomato+/Sca1+) and the hair follicle (Gli1-Tomato+/Sca1-) were FACS-sorted, randomly sequenced and clustered into epidermal (sub-)populations.
ORGANISM(S): Mus musculus 
2023-12-08 | E-MTAB-6031 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of C. elegans neurons
Not available
ORGANISM(S): Caenorhabditis elegans 
2005-07-13 | E-SMDB-1461 | biostudies-arrayexpress
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