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TranscriptomicsDefining Developmental Potency and Cell Lineage Trajectories by Expression Profiling of Differentiating Mouse ES Cells
Biologists rely on morphology, function, and specific markers to define the differentiation status of cells. Transcript profiling has expanded the repertoire of these markers by providing the snapshot of cellular status that reflects the activity of all genes. However, such data have been used only ...
ORGANISM(S): Mus musculus 
2008-12-27 | E-GEOD-11523 | biostudies-arrayexpress
UnknownSpatial transcriptomics identifies SPARC as a prognostic marker in interstitial lung diseases.
Not available
S-EPMC12337812 | biostudies-literature
ProteomicsMass spectrometry analysis of venom gland components of the parasitoid wasp Asobara japonica
(1) Secreted materials from the venom gland: 50 venom glands were cultured in 20 μL PBS for 2 hours. The cultured media were collected. Three biological replications were analyzed. (2) Lysates of the venom glands: 50 venom glands were squashed in 50 μL PBS and centrifuged. The supernatants were coll...
ORGANISM(S): Cellular Organisms 
2025-05-07 | PXD052039 | JPOST Repository
TranscriptomicsMicroarray analysis of FoxP3-expressing or non-expressing subsets of human CD4+ T cells
Gene expression profiles of subsets of CD4+ T cells according to their expression of FoxP3 and CD45RA were compared. Abstract: FoxP3 is a key transcription factor for the development and function of natural CD4+ regulatory T cells (Tregs). Here we show that human FoxP3+CD4+ T cells are composed of...
ORGANISM(S): Homo sapiens 
2009-05-21 | E-GEOD-15659 | biostudies-arrayexpress
TranscriptomicsInduced pluripotent stem cells from CINCA syndrome patients as a model for dissecting somatic mosaicism and drug discovery
Chronic infantile neurological cutaneous and articular (CINCA) syndrome is an IL-1-driven autoinflammatory disorder caused mainly by NLRP3 mutations. The pathogenesis of CINCA syndrome patients who carry NLRP3 mutations as somatic mosaicism has not been precisely described because of the difficulty ...
ORGANISM(S): Homo sapiens 
2012-06-10 | E-GEOD-38626 | biostudies-arrayexpress
TranscriptomicsTimed induction of 50 transcription factors in ES cells reveals a common mechanism to initiate differentiations
To decipher the structure and behaviors of the transcription factor (TF) network, we created 50 permanent mouse ES cell lines, in each of which one of the 50 transcription factors tagged with FLAG, is inserted into the doxycycline (dox)-repressible ROSA26 locus. Expression profiling reveals Cdx2 as ...
ORGANISM(S): Mus musculus 
2009-10-01 | E-GEOD-14559 | biostudies-arrayexpress
ProteomicsSchizophrenia brain proteomic analysis
The purpose of the study was to identify altered molecular networks in the prefrontal cortex of schizophrenia patients by comparing protein expression levels in autopsied brains of patients (n=10) and controls (n=10), using aquantitative proteomics.
ORGANISM(S): Homo Sapiens (human) 
2018-01-01 | PXD008227 | JPOST Repository
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