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ProteomicsArabidopsis chloroplast comparison by Masuda and Luu 2020
Relative comparison of the isolated chloroplasts between wild-type and tcr mutant in Arabidopsis: IDA and SWATH measurement
ORGANISM(S): Arabidopsis Thaliana (mouse-ear Cress) 
2021-04-02 | PXD020752 | JPOST Repository
ProteomicsEschericha coli proteomics with Tanaka and Tachikawa
Relative comparison of Escherichia coli proteome between wild-type and pta mutant
ORGANISM(S): Escherichia Coli 
2021-06-21 | PXD020753 | JPOST Repository
ProteomicsShotgun Proteomics Revealed Preferential Degradation of Misfolded In Vivo Obligate GroE Substrates by Lon Protease in Escherichia coli
Proteome analysis of a conditional GroE expression strain and its variants. Proteome data for the dnaKJ-deleted strain and its variant were also included.
ORGANISM(S): Escherichia Coli 
2022-06-27 | PXD033134 | JPOST Repository
ProteomicsProphage excision switches the primary ribosome rescue pathway and rescue-associated gene regulations in Escherichia coli
Total proteome analysis of CP4-57 prophage- and ssrA-related variants in Escherichia coli. Quantification was performed by SWATH-MS method.
ORGANISM(S): Escherichia Coli 
2022-12-07 | PXD033190 | JPOST Repository
ProteomicsA method to enrich polypeptidyl-tRNAs to capture snapshots of translation in the cell
Analysis of the peptides obtained from peptidyl-tRNA fraction. Peptidyl-tRNAs were purified by a new method, named PETEOS.
ORGANISM(S): Escherichia Coli 
2023-01-31 | PXD033726 | JPOST Repository
ProteomicsProteome data for unbiased curvature-gradient proteomics reveals anti-curvature sensors
The results contain measurements of protein interacting with membranes of three different curvatures (positive, negative, and zero curvature).
ORGANISM(S): Homo Sapiens (human) 
2026-09-10 | PXD078093 | JPOST Repository
ProteomicsPeptides from abortive pep-tRNAs in wt and delta-pth2 strain of S. cerevisiae
The peptides obtained from RNA fraction (with TriPURE isolation reagent). Two strains (WT and delta-pth2), and three technical replicates for each strain.
ORGANISM(S): Saccharomyces Cerevisiae (baker's Yeast) 
2022-12-06 | PXD031958 | JPOST Repository
ProteomicsE. coli wt/delta L31, IDA, rep1
E. coli wt/delta L31 IDA acquisition for constructing SWATH library, replicate 1
ORGANISM(S): Escherichia Coli 
2017-11-05 | PXD007803 | JPOST Repository
ProteomicsE. coli wt/delta L31, SWATH, rep3
E. coli wt/delta L31 differential analysis by SWATH acquisition, library is constructed by in-house IDA acquisition, replicate 3
ORGANISM(S): Escherichia Coli 
2017-11-05 | PXD007808 | JPOST Repository
ProteomicsE. coli wt/delta L31, IDA, rep2
E. coli wt/delta L31 IDA acquisition for constructing SWATH library, replicate 2
ORGANISM(S): Escherichia Coli 
2017-11-05 | PXD007805 | JPOST Repository
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