O-fucose - OmicsDI

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Metabolite Name

Thr-Tyr-Asp-Arg-Asn (1)
[(2R,3S,4S,5R)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-[[(E)-2-methylbut-2-enoyl]oxymethyl]-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]methyl (E)-2-methylbut-2-enoate (1)
[Met5,Lys6] alpha-Neo-Endorphin (1-6) (1)
Ile-Val-Ile-Phe-Asn (1)
2,4,5,6(1H,3H)-Pyrimidinetetrone,5-[2-(2-chlorophenyl)hydrazone] (1)
Bullatalicin (1)
15-deoxy--12,14-PGJ2-d4 (1)
2-docosanamidoethanesulfonic acid (1)
2,6,10,14-Tetramethyl-16-(5-methyl-3,6-dioxo-1,4-cyclohexadiene-1-yl)-2-hydroxy-6,10,14-hexadecatriene-3-one (1)
[(2S)-2-[9-(3,4-dimethyl-5-propylfuran-2-yl)nonanoyloxy]-3-hydroxypropyl] 11-(3,4-dimethyl-5-propylfuran-2-yl)undecanoate (1)
(2S,3R,4R,4aR,6aR,6bS,8aS,14bR)-2,3-dihydroxy-4,6a,6b,11,11,14b-hexamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicene-4,8a-dicarboxylate (1)
[(2S)-2-hexadecanoyloxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxypropyl] (Z)-octadec-9-enoate (1)
[10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl] 3-(3-methyl-5-pentylfuran-2-yl)propanoate (1)
(2R,3R,4R,5R)-2-[(9R)-9,13-dihydroxytridecyl]-5-(hydroxymethyl)pyrrolidine-3,4-diol (1)
N-Arachidonoyl-3-hydroxy-Aminobutyric Acid (1)
(1S,4aS,10aR)-6-[(4bS,8S,8aR)-8-carboxy-2-hydroxy-4b,8-dimethyl-1-propan-2-yl-5,6,7,8a,9,10-hexahydrophenanthren-3-yl]-7-hydroxy-1,4a-dimethyl-8-propan-2-yl-2,3,4,9,10,10a-hexahydrophenanthrene-1-carboxylic acid (1)
NCGC00384622-01_C34H42O14_(1S,2S,4S,5R,6R,7S,9R,12R)-12-Acetoxy-6-(acetoxymethyl)-2-hydroxy-2,10,10-trimethyl-5-[(2-methylbutanoyl)oxy]-11-oxatricyclo[7.2.1.0~1,6~]dodecane-4,7-diyl di(3-furoate) (1)
(1'R,2R,3S,4'S,6S,8'R,10'E,12'S,13'S,14'E,16'E,20'R,21'R,24'S)-2-butan-2-yl-21',24'-dihydroxy-12'-[(2R,4S,5S,6S)-5-hydroxy-4-methoxy-6-methyloxan-2-yl]oxy-3,11',13',22'-tetramethylspiro[2,3-dihydropyran-6,6'-3,7,19-trioxatetracyclo[15.6.1.14,8.020,24]pentacosa-10,14,16,22-tetraene]-2'-one (1)
(4'Z,7'Z,10'Z,13'Z,16'Z,19'Z)-4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoic acid, diester with 1,2,3-propanetriol (1)
3-Oxolanosta-7,24Z-dien-26-oic acid (1)
[(2R,3R)-5,7-dihydroxy-2-[3,4,6-trihydroxy-5-oxo-8-[(2R,3S)-3,5,7-trihydroxy-3,4-dihydro-2H-chromen-2-yl]benzo[7]annulen-1-yl]-3,4-dihydro-2H-chromen-3-yl] 3,4,5-trihydroxybenzoate (1)
(Gal1-4GlcNAc)2-Sp (1)
Ala-Lys-Gly-Lys-Ser (1)
DTDP-4-keto-2-deoxy-beta-L-xylose (1)
Phe-Lys-Leu-Arg (1)
Lys-Asn-Leu-Tyr-Thr (1)
Arg-Leu-Arg-Glu-Lys (1)
UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uloseuronic acid (1)
Hydrogen trioxo[3-(1lambdachromen-1-ylium-2-yl)phenoxy]-lambdasulfanuide (1)
(9R,10S,12S,13S,14R,16S,18R)-13-ethyl-8-methyl-8,15-diazahexacyclo[14.2.1.01,9.02,7.010,15.012,17]nonadeca-2,4,6-triene-14,18-diol (1)

First Public Date

2014 (2)
2025 (1)
2021 (1)
2019 (1)

Study type

Transcription profiling by array (8)
RNA-seq of coding RNA (3)
Unknown experiment type (1)

Release Date

2023 (21)
2022 (18)
2021 (18)
2024 (17)
2019 (17)
2015 (16)
2017 (16)
2011 (14)
2025 (14)
2020 (14)
2016 (14)
2018 (8)
2010 (7)
2014 (6)
2008 (5)
2012 (5)
2013 (4)
2009 (4)
2026 (3)
2007 (2)
2006 (1)
2005 (1)
2003 (1)
2002 (1)
2001 (1)
1999 (1)

Lab affiliation

Department of Biochemistry and Molecular Biology, University of Georgia, Athens (GA), USA (4)
Carnegie Mass Spectrometry Facility (2)
Complex Carbohydrate Research Center, Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA 30602, USA. (2)
Group Leader Cell&Developmental Biology John Innes Centre Norwich, UK (2)
University of Virginia (2)
Associate Professor, Biochemistry and Molecular Biology Department, University of Georgia, Athens, GA, United States of American (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Science, University of Utrecht, Padualaan 8, Utrecht, 3584 CH, The Netherlands (1)
Charles Perkins Centre, School of Medical Sciences, The University of Sydney, Sydney, NSW, Australia. (1)
Complex Carbohydrate Research Center (1)
Complex Carbohydrate Research Center, Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA. (1)
Complex Carbohydrate Reserach Center Department of Biochemistry and Molecular Biology University of Georgia Athens, GA 30621 USA (1)
Department of Biochemistry and Molecular Biology, Complex Carbohydrate Research Center, The University of Georgia, U.S.A. (1)
Department of Biochemistry and Molecular Biology, University of Georgia, Athens (GA), USA. (1)
Department of Biochemistry, Center for Biomedical Mass Spectrometry, Boston University School of Medicine, Boston, MA 02118, USA (1)
Department of Plant & Microbial Biology, University of Minnesota,St. Paul, MN, USA (1)
GIGA-Molecular Biology of Diseases-Viral Interactomes Network, Unniversité de Liège, Belgium (1)
Group Leader Cell & Developmental Biology John Innes Centre Norwich UK (1)
Group leader Cell&Developmental Biology John Innes Centre Norwich, UK (1)
Max Planck Institute for Dynamics of Complex Technical Systems Bioprocess Engineering Bio/Process Analytics (1)
Melbourne Dental School, University of Melbourne (1)
Peking University (1)
School of Chemistry and Molecular Biosciences (1)
Universitaet fuer Bodenkultur - Institute of Biochemistry (BCH) (1)
University of Copenhagen, Copenhagen Center for Glycomics (1)
Zoonosis Science Center, Department of Medical Sciences, Uppsala University, Uppsala SE-75185, Sweden (1)
university of florida (1)

Tags

xref:PubMed:42080264 (1)
xref:PubMed:40196518 (1)
xref:PubMed:34215830 (1)

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O-Fucose glycans on mouse NOTCH1 from activated T cells of Fringe mutant mice

NOTCH1 (N1) is a transmembrane receptor that initiates a cell-cell signaling pathway controlling various cell fate specifications in metazoans. The addition of O-fucose by Protein O-fucosyltransferase 1 (POFUT1) to Epidermal Growth Factor-like (EGF) repeats in the N1 extracellular domain is essentia...

ORGANISM(S): Mus musculus (Mouse)

2022-08-12 | PXD031297 | Pride

Glycoproteomic analysis of fucose-containing proteins in small intestine identified cryptdin-related sequence 1 as O-glycosylated proteins modified with α1,2-fucose

The modification of galactose with α1,2-fucose is involved in symbiosis with intestinal bacteria and elimination of pathogenic bacteria. It is postulated that α1,2-fucosylated mucin secreted from goblet cells is involved in defending an organism against infections, but the detailed molecular mechani...

ORGANISM(S): Mus Musculus (mouse)

2020-11-05 | PXD022132 | JPOST Repository

Analysis of endogenous NOTCH1 from POFUT1 S162L patient fibroblasts reveals the importance of the O-fucose modification on EGF12 in human development

NOTCH1 (N1) is a transmembrane receptor interacting with membrane-tethered ligands on opposing cells that mediate the direct cell-cell interaction necessary for many cell fate decisions. Protein O-fucosyltransferase 1 (POFUT1) adds O-fucose to Epidermal Growth Factor (EGF)-like repeats in the NOTCH ...

ORGANISM(S): Homo sapiens (Human)

2024-08-02 | PXD050256 | Pride

Notch1 Mass spectrometry O-fucose Pofut1

Mapping sites of O-fucose modification on mouse NOTCH2

The O-fucose modification sites on mouse NOTCH2 were determined by mass spectral glycoproteomic site mapping. The Extracellular Domain of mouse NOTCH2 was produced in HEK293T cells in the presence or absence of the three Fringe enzymes: Lunatic fringe, Manic fringe, or Radical fringe. The protein w...

ORGANISM(S): Homo sapiens (Human)

2020-09-11 | PXD020431 | Pride

Notch2 Egf repeats O-fucose Fringe

Novel antibodies detect nucleocytoplasmic O-fucose in protist pathogens, cellular slime molds, and plants.

Not available

S-EPMC11853108 | biostudies-literature

Modulation of the NOTCH1 pathway by LUNATIC FRINGE is dominant over that of MANIC or RADICAL FRINGE

Fringes are glycosyltransferases that transfer a GlcNAc to O-fucose residues on Epidermal Growth Factor-like (EGF) repeats. Three Fringes exist in mammals: LUNATIC FRINGE (LFNG), MANIC FRINGE (MFNG) and RADICAL FRINGE (RFNG). Fringe modification of O-fucose on EGF repeats in the NOTCH1 (N1) extracel...

ORGANISM(S): Mus musculus (Mouse)

2021-09-28 | PXD027619 | Pride

O-fucosylation Glycosylation Notch1 Fringe Egf-like domains

Fringe GlcNAc-transferases differentially extend O-fucose on endogenous NOTCH1 in mouse activated T cells.

Not available

S-EPMC9234238 | biostudies-literature

Novel antibodies detect nucleocytoplasmic O-fucose in protist pathogens, cellular slime molds, and plants.

Not available

S-EPMC11507795 | biostudies-literature

Roles of Pofut1 and O-fucose in mammalian Notch signaling.

Not available

S-EPMC2376238 | biostudies-literature

O-Fucose and Fringe-modified NOTCH1 extracellular domain fragments as decoys to release niche-lodged hematopoietic progenitor cells.

Not available

S-EPMC8176772 | biostudies-literature

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