Outer membrane vesicle proteins

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Unknown (156)
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Homo sapiens (22)
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155615 (1)
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Organisms

Tectiviridae (1)
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Repository

biostudies-arrayexpress (90)
pride (45)
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geo (2)
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Tissue

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Cell (1)
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Disease

Colorectal cancer (2)
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Wounds and Injuries (1)

Technology Type

Mass Spectrometry (45)
Shotgun proteomics (29)
Gel-based experiment (9)
Bottom-up proteomics (5)
Data-independent acquisition (4)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Top-down proteomics (2)
Mass spectrometry assay (1)
MSE (1)

Instrument Platform

NextSeq 500 (3)
Scanning hardware (2)
Illumina HiSeq 2000 (2)
Illumina HiSeq 4000 (2)
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AB SOLiD 4 System (1)
Other (1)
Axon- GenePix4000B (1)
Illumina MiSeq (1)
Illumina HiSeq 2500 (1)
Instrument (1)
LTQ (1)
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Q Exactive (1)
Q Exactive Plus (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2014 (15)
2022 (12)
2010 (10)
2016 (9)
2021 (8)
2025 (8)
2023 (7)
2015 (7)
2012 (7)
2011 (7)
2018 (6)
2013 (6)
2009 (6)
2008 (6)
2006 (6)
2026 (6)
2019 (6)
2024 (5)
2017 (3)
2020 (3)
2007 (2)
2005 (2)
2004 (2)

Metabolite Name

(10E,15Z)-9,12,13-Trihydroxyoctadeca-10,15-dienoic acid (1)
(2-aminoethoxy)[-2-[hexadec-9-enoyloxy]-3-(hexadecanoyloxy)propoxy]phosphinic acid (1)
(2-aminoethoxy)[3-(hexadecanoyloxy)-2-[icosa-5.8.11.14-tetraenoyloxy]propoxy]phosphinic acid (1)
(2R)-2,4-Dihydroxy-3,3-dimethylbutanoic acid (1)
(2R)-6-Oxo-2-piperidinecarboxylic acid (1)
(2S)-4-amino-2-[(azaniumylacetyl)amino]-4-oxobutanoate (1)
(3-Aminopropyl)(diethoxymethyl)phosphinic acid (1)
(3E)-4-(1-Hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)but-3-en-2-yl 6-O-pentopyranosylhexopyranoside (1)
(4-Aminophenyl)phosphonic acid (1)
(E)-N-[2-hydroxy-2-(4-hydroxyphenyl)ethyl]-3-(4-hydroxy-3-methoxyphenyl)prop-2-enamide (1)
(Sulfanylsulfonyl)methane (1)
.alpha.,.alpha.'-Trehalose 6-phosphate (1)
.beta.-Hydroxyphenylalanine (1)
1,2-Anhydro-myo-inositol (1)
1,2-Di(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-sn-glycero-3-phosphoethanolamine (1)
1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine-N-methyl (1)
1,2-Dipalmitoleoyl-sn-glycero-3-phosphoethanolamine (1)
1,3,7-Trimethyluric acid (1)
1,5-Anhydroglucitol (1)
1-(Hydroxymethyl)-5,5-dimethylhydantoin (1)
1-Hydroxy-2-naphthoic acid (1)
1-Methylxanthine (1)
1-[(4-Chlorophenyl)methyl]-3-[(1,1-dimethylethyl)thio]-.alpha.,.alpha.- dimethyl-5-(1-methylethyl)-1H-indole-2-propanoic acid (1)
10-Hydroxydecanoic acid (1)
11-Dehydrocorticosterone (1)
12-Hydroxystearic acid (1)
12-Methyltridecanoic acid (1)
13(S)-HODE (1)
13(S)-HpOTrE (1)
16-Hydroxypalmitic acid (1)

First Public Date

2026 (1)
2024 (1)
2013 (1)

Classification

viruses (1)
bacteria (1)

Study type

Transcription profiling by array (46)
ChIP-seq (11)
RNA-seq of coding RNA (8)
ChIP-chip by array (7)
ChIP-chip by tiling array (3)
Comparative genomic hybridization by array (3)
Other (3)
CLIP-seq (2)
Unknown experiment type (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
RNAi profiling by array (1)
RIP-seq (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2014 (25)
2021 (23)
2015 (18)
2019 (17)
2022 (16)
2020 (14)
2016 (13)
2023 (12)
2010 (12)
2024 (12)
2008 (11)
2025 (11)
2017 (9)
2013 (9)
2012 (9)
2011 (8)
2009 (7)
2006 (7)
2018 (3)
2007 (3)
2005 (3)
2004 (2)
2026 (1)
2002 (1)

Lab affiliation

Institute of Microbiology, Department of Microbial Proteomics, Center for Functional Genomics of Microbes, University of Greifswald, 17489 Greifswald, Germany (3)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (2)
Aarhus University, Denmark (1)
Assistant professor, School of Biological Sciences, Seoul National University. (1)
Baker Heart and Diabetes Inst. (1)
Bavarian Center for Biomolecular Mass Spectrometry, Freising, TU Munich (1)
Biozentrum, University of Basel, Switzerland. (1)
Chun-Hung Lin's Lab, Institute of Biological Chemistry, Academia Sinica, No. 128 Academic Road Section 2, Nan-Kang, Taipei, 11529, Taiwan (1)
College of chemistry and molecular engineering, Peking University (1)
Department and Graduate Institute of Biology and Anatomy, National Defense Medical Center, Taipei, Taiwan (1)
Department of Biological Sciences, University of Notre Dame,Notre Dame, INDIANA 46556, USA (1)
Department of Life Sciences, Pohang University of Science and Technology (POSTECH), Pohang, Republic of Korea (South Korea) (1)
Department of Medical Microbiology and Infectious Diseases University of Manitoba 745 Bannatyne Avenue Winnipeg, MB, Canada, R3E 0J9 (1)
Department of Microbiology, Faculty of Medicine, Chulalongkorn University, Pathumwan, Bangkok, Thailand (1)
Department of Microbiology, Institute of Biomedical Sciences, University of São Paulo (1)
Department of Molecular Medicine and Pathology, University of Auckland, Auckland, New Zealand (1)
Department of Pharmaceutical Sciences, College of Pharmacy, Oregon State University, Corvallis, Oregon 97331, USA (1)
Department of Pre-Clinical Sciences, Institute of Veterinary Medicine, Warsaw University of Live Sciences – SGGW Poland (1)
EDyP (1)
Faculty of Biology, University of Freiburg, Freiburg, Germany (1)
GlaxoSmithKline, Siena, Italy (1)
Graduate Institute of Life Sciences, National Defense Medical Center, Taipei, Taiwan (1)
Head of Proteomics (1)
KOREA BASIC SCIENCE INSTITUTE (1)
Laboratorio de Biofilms Microbianos, Departamento de Microbiología, Instituto de Investigaciones Biológicas Clemente Estable (1)
Laboratory of Molecular Environmental Microbiology, Department of Environmental Science and Ecological Engineering, Korea University, Seoul 02841, Republic of Korea (1)
Lee Kong Chian School of Medicine, Nanyang Technological University, Singapore (1)
MIB, Univesitry of Manchester (1)
Medical Microbiology and Immunology, University of Wisconsin-Madison (1)
Melbourne Dental School, University of Melbourne, Australia (1)

Tags

pathogen (2)
xref:PubMed:40043411 (1)
xref:PubMed:26859882 (1)
pathogen:virus (1)
pathogen:bacterium (1)

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Proteomic network of antibiotic-induced outer membrane vesicles released by extensively drug-resistant Elizabethkingia anophelis

Elizabethkingia anophelis, antibiotic resistance, outer membrane vesicle, proteomics, protein-protein interaction.

ORGANISM(S): Elizabethkingia anophelis

2022-07-11 | PXD033858 | Pride

Biopearling: Chains of interconnected outer membrane vesicles in a marine flavobacterium

Large surface-to-volume ratios provide optimal nutrient uptake conditions for small microorganisms in oligotrophic habitats. The surface area can be increased with appendages. Here we describe chains of interconnecting vesicles protruding from cells of the flavobacterial strain Hel3_A1_48 originatin...

ORGANISM(S): Formosa sp. Hel3_A1_48

2019-07-25 | PXD012522 | Pride

Formosa Algal blooms Flavobacteria Outer membrane vesicles Biopearling

Identification of immunogenic outer membrane vesicle vaccine antigen components using a meningococcal protein microarray

PRJNA1165204 | ENA

Outer membrane vesicle proteome of Aggregatibacter actinomycetemcomitans serotype e strain 173

Aggregatibacter actinomycetemcomitans is an oral and systemic pathogen associated with aggressive forms of periodontitis, and with endocarditis. Outer membrane vesicles (OMVs) released by this species have been demonstrated to deliver effector proteins such as cytolethal distending toxin (CDT) and l...

ORGANISM(S): Aggregatibacter actinomycetemcomitans (Actinobacillus actinomycetemcomitans) (Haemophilus actinomycetemcomitans)

2015-09-21 | PXD002509 | Pride

Gram negative Aggregatibacter actinomycetemcomitans Outer membrane vesicles Lc-ms/ms

Porphyromonas gingivalis Outer Membrane Vesicle and cell Proteome in heme excess and heme limited

Porphyromonas gingivalis is an anaerobic, Gram-negative oral pathogen associated with chronic periodontitis. P. gingivalis has an obligate requirement for heme which it obtains from the host. Heme availability has been linked to disease initiation and progression. In this study we used continuous cu...

ORGANISM(S): Porphyromonas gingivalis W50

2018-05-18 | PXD009730 | Pride

Porphyromonas gingivalis Heme Maxquant Outer membrane vesicles

Regulation of outer-membrane proteins (OMPs) A and F, during hlyF-induced outer-membrane vesicle (OMV) biosynthesis.

Not available

S-EPMC6610587 | biostudies-literature

Cotranslational signal independent SRP preloading during membrane targeting

Cotranslational targeting into the endoplasmic reticulum (ER) by the Signal Recognition Particle (SRP) is a key event determining polypeptide fate in eukaryotic cells. Here, we globally define the principles and mechanisms of SRP binding and ER targeting in vivo. Cotranslational targeting through SR...

ORGANISM(S): Saccharomyces cerevisiae

2016-08-03 | E-GEOD-74393 | biostudies-arrayexpress

Outer membrane vesicle of Pseudomonas aerugionsa

Objectives: This study aimed to investigate the microbiological characteristics of outer membrane vesicles (OMVs) derived from Pseudomonas aeruginosa (P. aeruginosa) to understand their mechanisms of inhibition of Acinetobacter baumannii (A. baumannii) in vitro. Methods: We assessed the inhibitory e...

ORGANISM(S): Pseudomonas aeruginosa

2023-09-18 | PXD045094 | Pride

Lc-msms Pseudomonas aeruginosa Outer membrane vesicle

Proteomic analysis of Pseudomonas aeruginosa purified outer membrane vesicle (OMV) extracts exposed to sex steroids

The project aims to elucidate mechanisms driving P. aeruginosa response to sex steroids hormones. An experiment involving outer membrane vesicles (OMV) extraction combined with Mass spectroscopy was performed to identify differences in P. aeruginosa OMVs proteins produced while being exposed to estr...

ORGANISM(S): Pseudomonas aeruginosa PAO1

2021-09-08 | PXD019470 | Pride

Outer membrane vesicles Pseudomonas aeruginosa Sex steroid

Quantitative proteomic analysis of outer membrane vesicles from Fusobacterium nucleatum in the cancer environment

At present, the function of Fusobacterium nucleosocci outer membrane vesicles under normal intestinal environmental pH conditions has been mainly studied, but there are few studies related to the function of Fusobacterium nucleosius outer membrane vesicles under cancer microenvironment pH conditions...

ORGANISM(S): Fusobacterium Nucleatum Subsp. Vincentii

2022-10-18 | PXD037520 |

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