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ProteomicsThe ProCan90 HEK293 dataset - A Case Study and Methodology for OpenSWATH Parameter Optimization Using the ProCan90 Data Set and 45 810 Computational Analysis Runs
A collection of HEK293 SWATH-MS raw data files generated as part of the routine operation of the ProCan experimental facility. These files represent technical replicates each being an aliquot from the same pooled digest, with fifteen runs collected from each of the six Sciex Triple TOF 6600 mass spe...
ORGANISM(S): Homo sapiens (Human) 
2019-04-11 | PXD011093 | Pride
Human Lc-ms Procan 
UnknownMass cytometry reveals cellular fingerprint associated with IgE+ peanut tolerance and allergy in early life.
Not available
S-EPMC7046671 | biostudies-literature
ProteomicsChemical and Random Additive Noise Elimination (CRANE) - case_study - multicenter_dataset
The effectiveness of the novel electrospray ionisation - liquid chromatography mass spectrometry (ESI-LC-MS) data de-noising technique, CRANE, is demonstrated by denoising the MS1 and all the MS2 windows of the multicentre, data-independent acquisi-tion (DIA) MS dataset from Navarro, et al. (2016).
ORGANISM(S): Homo sapiens (Human) Escherichia coli Saccharomyces cerevisiae (Baker's yeast) 
2021-07-26 | PXD020529 | Pride
Lc-msms Random noise Chemical noise Denoise Baseline noise Dia 
UnknownMass cytometry analysis of blood from peanut-sensitized tolerant and clinically allergic infants.
Not available
S-EPMC9715645 | biostudies-literature
ProteomicsMITOMICS: defining mitochondrial protein functions through deep multi-omic profiling
Mitochondria are epicenters of eukaryotic metabolism and bioenergetics. Pioneering efforts in recent decades have established the core protein componentry of these organelles and have linked their dysfunction to over 150 distinct disorders. However, hundreds of mitochondrial proteins still lack clea...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-01-11 | MSV000086685 | MassIVE
MetabolomicsGNPS - MITOMICS: defining mitochondrial protein functions through deep multi-omic profiling
Mitochondria are epicenters of eukaryotic metabolism and bioenergetics. Pioneering efforts in recent decades have established the core protein componentry of these organelles and have linked their dysfunction to over 150 distinct disorders. However, hundreds of mitochondrial proteins still lack clea...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2021-01-11 | MSV000086685 | GNPS
UnknownUpdated threshold dose-distribution data for sesame.
Not available
S-EPMC9790362 | biostudies-literature
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