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TranscriptomicsGlobal gene expression analysis of the phytopathogen Xylella fastidiosa at high iron availability
Xylella fastidiosa is the etiologic agent of a wide range of plant diseases including citrus variegated chlorosis (CVC), a major threat to the Brazilian citrus industry. Genome sequences of several strains of this phytopathogen are accessible, enabling large-scale functional studies. Transcript leve...
ORGANISM(S): Xylella fastidiosa 
2007-09-01 | E-GEOD-5886 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of the phytopathogen Xylella fastidiosa at low iron availability
Xylella fastidiosa is the etiologic agent of a wide range of plant diseases including citrus variegated chlorosis (CVC), a major threat to the Brazilian citrus industry. Genome sequences of several strains of this phytopathogen are accessible, enabling large-scale functional studies. Transcript leve...
ORGANISM(S): Xylella fastidiosa 
2007-08-31 | E-GEOD-5888 | biostudies-arrayexpress
UnknownNatural variation in the hrpL promoter renders the phytopathogen Pseudomonas syringae pv. actinidiae nonpathogenic.
Not available
S-EPMC9923390 | biostudies-literature
ProteomicsProteomics of the phytopathogen Dickeya dadantii
Here, we present the proteome characterization of Dickeya dadantii by shotgun proteomics (Data Dependent acquisition, DDA mode).
ORGANISM(S): Dickeya dadantii subsp. dadantii 
2017-01-02 | PXD004438 | Pride
Lc-msms Bacteria Mrm assay 
TranscriptomicsDsbA plays a critical and multi-faceted role in the production of secreted virulence factors by Erwinia carotovora
Erwinia carotovora subsp. atroseptica (Eca) is an enterobacterial phytopathogen causing economically-significant soft rot disease. Pathogenesis is mediated by multiple secreted virulence factors, many of which are secreted by the Type II (Out) secretion system. DsbA catalyses the introduction of dis...
ORGANISM(S): Pectobacterium carotovorum 
2010-06-20 | E-GEOD-10647 | biostudies-arrayexpress
UnknownGenome-wide identification of HrpL-regulated genes in the necrotrophic phytopathogen Dickeya dadantii 3937.
Not available
S-EPMC2957411 | biostudies-literature
UnknownRecombinase Polymerase Amplification Assay with and without Nuclease-Dependent-Labeled Oligonucleotide Probe.
Not available
S-EPMC8584857 | biostudies-literature
UnknownIntegrated downstream regulation by the quorum-sensing controlled transcription factors LrhA and RcsA impacts phenotypic outputs associated with virulence in the phytopathogen Pantoea stewartii subsp. stewartii.
Not available
S-EPMC5723134 | biostudies-literature
TranscriptomicsNanopore native RNA-seq for genome-wide identification of transcription units and transcriptional termination sites in the phytopathogen Dickeya dadantii 3937
In this study, based on Nanopore direct RNA-seq where native RNAs are sequenced directly as near full-length transcripts in the 3' to 5' direction, transcription units of the phytopathogen Dickeya dadantii 3937 were validated and transcriptional termination sites were determined. Briefly, D. dadanti...
ORGANISM(S): Dickeya dadantii 3937 
2022-01-01 | E-MTAB-10482 | biostudies-arrayexpress
TranscriptomicsRole of σ54 in the regulation of genes involved in biogenesis of type I and type IV pili in Xylella fastidiosa
The phytopathogen Xylella fastidiosa produces two classes of pili, long type IV pili and short type I pili, which are involved in motility and adhesion. In this work, we have investigated the role of σ54 factor and its involvement in the regulation of fimbrial biogenesis in X. fastidiosa. An rpoN n...
ORGANISM(S): Xylella fastidiosa 
2010-06-25 | E-GEOD-8097 | biostudies-arrayexpress
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