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TranscriptomicsTranscription profiling of Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection
Virus infection induces activation and suppression of global gene expression in the host. Profiling gene expression changes in the host may provide insights into the molecular mechanisms that underlie host physiological and phenotypic responses to virus infection. In this study, the Arabidopsis Affy...
ORGANISM(S): Arabidopsis thaliana 
2008-11-07 | E-GEOD-11217 | biostudies-arrayexpress
GenomicsPlum pox virus
Plum pox virus Genome sequencing and assembly
PRJNA479658 | ENA
GenomicsPlum pox virus strain:Marcus | isolate:KZMRM1
Genome sequencing of a Plum pox virus isolate KZMRM1 (strain M) from Spain
PRJNA1359765 | ENA
ProteomicsCommon and strain-specific post-translational modifications of the potyvirus Plum pox virus coat protein in different hosts
Phosphorylation and O-GlcNAcylation are widespread post-translational modifications (PTMs) often sharing protein targets. Numerous studies have reported phosphorylation of plant virus proteins. In plants, research on O-GlcNAcylation lags behind regarding other eukaryotes and information about O-GlcN...
ORGANISM(S): Plum pox virus 
2020-05-27 | PXD017780 | Pride
Capsid protein  o-glcnacylation  phosphorylation  sharka  potyvirus 
ProteomicsCherry Adapted Plum Pox Virus (PPV) CR Isolate Alters the Abundance of Proteins Involved in Photosynthesis and Stress-response of the Experimental Herbaceous Host Nicotiana benthamiana More Aggressively than the Mild PPV-C Isolate
Plum pox virus (PPV, family Potyviridae) is one of the most important viral pathogens of Prunus spp. causing considerable damage to stone-fruit industry worldwide each year. Among the PPV strains identified so far, only PPV-C and PPV-CR are able to infect cherries under natural conditions. Herein, w...
ORGANISM(S): Nicotiana benthamiana Plum pox virus 
2018-08-13 | PXD010018 | Pride
Tobacco Lc-ms Compatible interaction Photosynthesis Sharka Ppv Label-free quantification Antioxidants 
TranscriptomicsHost responses of Nicotiana benthamiana to infection by multiple plant viruses
Objectives: Our work focuses on the responses of Solanaceous plants to viruses that cause economically important diseases in tree fruits. Using mock inoculated leaf tissue as a reference, we plan to compare the gene expression profiles of Nicotiana Benthamiana plants infected with one of three viru...
ORGANISM(S): Nicotiana benthamiana 
2007-09-01 | E-GEOD-8256 | biostudies-arrayexpress
TranscriptomicsMiSeq of viral-derived RT-PCR amplicons from plants infected with different versions of plum pox virus
RT-PCR amplicons were used to explore the haplotypes in each viral progeny to assess variability
ORGANISM(S): Plum pox virus 
2020-01-24 | E-MTAB-8399 | biostudies-arrayexpress
Genomics
Plum pox virus populations in peach and American plum
PRJNA881753 | ENA
ProteomicsPhosphorylation coexists with O-GlcNAcylation in a plant virus protein and shapes viral infection
Phosphorylation and O-GlcNAcylation are two widespread post-translational modifications (PTM) often affecting the same eukaryotic target protein. Plum pox virus (PPV) is a member of the genus Potyvirus that infects a wide range of plant species. O-GlcNAcylation of the capsid protein (CP) of PPV has ...
ORGANISM(S): Nicotiana benthamiana 
2022-03-03 | PXD006159 | Pride
Yin-yang Plant virus O-glcnacylation Plum pox virus Phosphorylation Potyvirus Coat protein Crosstalk 
TranscriptomicsAltered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection
Virus infection induces activation and suppression of global gene expression in the host. Profiling gene expression changes in the host may provide insights into the molecular mechanisms that underlie host physiological and phenotypic responses to virus infection. In this study, the Arabidopsis Affy...
ORGANISM(S): Arabidopsis thaliana 
2008-11-04 | GSE11217 | GEO
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