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ProteomicsA Comparative Proteomic Analysis of Whey Protein from Early, Mid and Late Lactation Stages of Indian Indigenous Breed, MalnadGidda (Bosindicus)
Different lactation stages have marked influence on milk yield, milk constituents and nourishment of the neonates. However, the differential gene expression during different lactation stages in Bosindicus has not been investigated so far. In this study, we carried out high-resolution mass spectromet...
ORGANISM(S): Bos indicus 
2018-02-16 | PXD007655 | Pride
Ultracentrifugation Tmt labeling Isoelectric precipitation Brplc Biomarker 
TranscriptomicsTranscription profiling of S. cerevisiae and C. albicans wild type strains or strains deleted for transcription factor encoding genes involved in pleiotropic drug resistance after treatment with different doses of progesterone
This work aimed at analysing the transcriptome response of S. cerevisiae and C. albicans strains, wild type or deleted for transcription factor encoding genes involved in pleiotropic drug resistance, to three different doses of progesterone, inoculated for three different time periods.
ORGANISM(S): Saccharomyces cerevisiae 
2007-11-13 | E-TABM-345 | biostudies-arrayexpress
ProteomicsQuantitative proteomics profiling of spermatozoa and seminal plasma reveals proteins associated with semen quality in Bos indicus bulls
Primary aim of the analysis was to identify proteomic differences in the semen samples of Bos indicus that accounts for high or low ERR. This was achieved through tandem mass-tags based quantitative proteomics approach coupled to LC-MS/MS methods. An Orbitrap Fusion Tribrid mass spectrometer (Thermo...
ORGANISM(S): Bos taurus (Bovine) 
2024-07-15 | PXD034096 | Pride
Bos indicus Quantitative proteomics Tmt Spermatozoa Animal reproduction Veterinary research Seminal plasma 
ProteomicsExploring molecular dynamics indicators associated with reproductive performance of Bos indicus cattle in plasma samples through data-independent acquisition mass spectrometry
Aim of the study was to profile the blood plasma proteome of healthy Bos indicus cattle and use it as a baseline against which to compare different conditions in Bos indicus cattle, such as disease, reproduction associated proteins and pregnancy specific proteins etc. Data-independent acquisition (D...
ORGANISM(S): Bos taurus (Bovine) 
2024-07-15 | PXD034103 | Pride
Lc-ms/ms-dia Bos indicus Quantitative proteomics Plasma Animal reproduction Diary research 
UnknownCrystal-facet-dependent denitrosylation: modulation of NO release from S-nitrosothiols by Cu2O polymorphs.
Not available
S-EPMC6540961 | biostudies-literature
ProteomicsA proteomic landscape of the spatiotemporal influence of Interleukin-33 (IL-33) in monocytes
Interleukin-33 (IL-33), a member of the IL-1 superfamily cytokines, is an endogenous danger signal and a nuclear-associated cytokine. It is one of the essential mediators of both innate and adaptive immune responses. Aberrant IL-33 signaling has been demonstrated to play a defensive role against var...
ORGANISM(S): Homo sapiens (Human) 
2022-02-16 | PXD028673 | Pride
Innate immunity Inflammation Cytokines Mass spectrometry Signaling Monocytes 
TranscriptomicsCHD1 remodelers space nucleosomes in vitro and link regular arrays to 5M-bM-^@M-^Y ends of genes in S. Pombe
Nucleosome positioning governs access to eukaryotic genomes. Many genes show a stereotypic organisation at their 5M-bM-^@M-^Y end: a nucleosome free region just upstream of the transcription start site (TSS) followed by a regular nucleosomal array over the coding region. The determinants for this pe...
ORGANISM(S): Schizosaccharomyces pombe 
2012-10-11 | E-GEOD-41024 | biostudies-arrayexpress
ProteomicsIntegrated multi-omic analysis of M. tuberculosis H37Ra redefines virulence attributes
M. tuberculosis H37Ra, an avirulent tubercle bacillus, is a commonly used model to investigate virulence attenuation in M. tuberculosis. Comparative high-throughput studies have earlier correlated its avirulence to the presence of specific mutations or absence of certain proteins. However, a recent ...
ORGANISM(S): Mycobacterium tuberculosis H37Ra 
2018-10-22 | PXD008555 | Pride
Genome annotation Tuberculosis Virulence attenuation Orbitrap Next-generation sequencing 
ProteomicsGut bacterial phytohormone modulates olfactory sensing, chemotaxis and mortality in fruit fly (Drosophila melanogaster): a new dimension to gut-brain axis
Aim of the study was to profile and quantify the proteins head region of D. melanogaster that are changing as a result of phytohormone administration. Data-independent acquisition (DIA) bases quantitative proteomics approach were used to achieve this aim. An Orbitrap Fusion Tribrid mass spectrometer...
ORGANISM(S): Drosophila melanogaster (Fruit fly) 
2024-05-22 | PXD044924 | Pride
Phytohormone Quantitative proteomics Drosophila melanogaster Data independent acquisition Olfactory sensing 
ProteomicsProteomic analysis of human sclera tissue using high resolution mass spectrometry
The sclera is white, tough outer covering, known for providing structural support to the eyeball and the intraocular contents. Any abnormality in sclera results in disorders such as conjunctivitis, episcleritis, scleritis and hence a proper investigation will help in preventing the same. In the curr...
ORGANISM(S): Homo sapiens (Human) 
2019-02-21 | PXD008999 | Pride
Protein profiling Omics technology Tandem mass spectrometry Protein abundance Eye proteome 
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