Pre-neoplasia - OmicsDI

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Organisms

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mouse gut metagenome (1)
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Organisms

Mus musculus (23)
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Repository

biostudies-arrayexpress (1355)
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geo (26)
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Tissue

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Disease

Normal (10)
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Technology Type

Mass spectrometry (15)
Illumina HiSeq 2000 (6)
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Mass Spectrometry (4)
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NextSeq 500, ILLUMINA (1)
Exiqon 7th generation miRCURY LNA microRNA microarray system (1)
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Illumina HiSeq 2500, ILLUMINA (1)
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Affymetrix SNP 6.0 (1)
NextSeq 500, Illumina HiScanSQ (1)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2500, Illumina HiSeq 2000 (1)
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SRM/MRM (1)

Instrument Platform

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AB 5500xl Genetic Analyzer (2)
Maxwell® RSC 48 Instrument (Promega, AS8500) (1)
Transrectal ultrasound-guided systematic sampling of prostate tissue (TRUS biopsy) (1)
Coulter Automated Workstation Biomek i7 Hybrid (1)
RNeasy 96-well plate kit (1)
NEXTflex Small-RNA Seq kit v3 (Perkin Elmer) & NEXTflex Rapid XP DNA-seq kit v2 (Perkin Elmer) (1)
Direct-zol RNA microprep kit (Zymo Research), LabChip RNA pico sensitivity assay, Perkin Elmer & Nucleospin RNA kit (Macherey Nagel) (1)
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Agilent miRNA Complete Labeling and Hyb Kit (1)
Extraction kit (1)
DNA Microarray Scanner (Model G2505C, Agilent Technologies) (1)

Publication Date

2013 (196)
2012 (178)
2014 (162)
2011 (162)
2015 (147)
2010 (147)
2008 (76)
2016 (70)
2009 (56)
2025 (32)
2007 (31)
2023 (29)
2017 (29)
2020 (28)
2018 (28)
2021 (25)
2022 (19)
2024 (16)
2019 (14)
2005 (13)
2026 (12)
2006 (6)
2003 (1)
2002 (1)

UNIPROT ID/AC

A0A024R563 (1)
A0A024R8H9 (1)
A0A024RAN2 (1)
A0A024RC46 (1)
A0A075B6P5 (1)
A0A087WT59 (1)
A0A087WTX5 (1)
A0A087WUD1 (1)
A0A087WVW2 (1)
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A0A0A0MS51 (1)
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A0A0B4J1V0 (1)
A0A0B4J220 (1)
A0A0C4DG89 (1)
A0A0C4DGT3 (1)
A0AUZ9 (1)
A0AV96 (1)
A0AVF1 (1)

ENSEMBL ID

ENSG00000147251 (1)
ENSG00000170477 (1)
ENSG00000204131 (1)
ENSG00000229353 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:32816 (8)
CHEBI:16761 (7)
CHEBI:30769 (7)
CHEBI:6650 (6)
CHEBI:15741 (6)
CHEBI:15428 (6)
CHEBI:18012 (6)
CHEBI:30915 (6)
CHEBI:15422 (6)
CHEBI:16027 (6)
CHEBI:17154 (6)
CHEBI:16737 (6)
CHEBI:16919 (6)
CHEBI:15354 (6)
CHEBI:17822 (5)
CHEBI:26271 (5)
CHEBI:49033 (5)
CHEBI:15356 (5)
CHEBI:17126 (5)
CHEBI:22660 (5)
CHEBI:27570 (5)
CHEBI:26986 (5)
CHEBI:16811 (5)
CHEBI:28300 (5)
CHEBI:15676 (5)
CHEBI:16708 (5)
CHEBI:17755 (5)
CHEBI:16742 (5)
CHEBI:17748 (5)
CHEBI:24898 (5)

Metabolite Name

AMP (6)
ADP (6)
ATP (5)
FAD (4)
CMP (4)
UMP (4)
GDP (4)
Succinate (4)
NADH (4)
Fumarate (4)
Citrate (4)
Pyruvate (4)
Adenylosuccinate (3)
UDP-glucuronate (3)
UDP-glucose (3)
Malate (3)
UTP (3)
UDP (3)
CTP (3)
CDP-choline (3)
NAD+ (3)
DCMP (3)
NADPH (3)
GMP (3)
Ornithine (3)
Cystine (3)
Choline (3)
CDP (3)
Pyruvic acid (3)
Phenylalanine (3)

First Public Date

2023 (8)
2014 (7)
2024 (5)
2020 (5)
2021 (4)
2025 (3)
2019 (3)
2017 (2)
2013 (2)
2022 (1)
2015 (1)

Study status

Not provided (4)
Completed (4)
Active, not recruiting (1)
Recruiting (1)

Study type

Transcription profiling by array (973)
RNA-seq of coding RNA (83)
Comparative genomic hybridization by array (46)
MicroRNA profiling by array (40)
RNA-seq of non coding RNA (37)
ChIP-seq (26)
Transcription profiling by RT-PCR (25)
Methylation profiling by array (24)
Unknown experiment type (15)
Other (13)
Genotyping by array (9)
RNA-seq of coding RNA from single cells (9)
RNAi profiling by array (7)
MicroRNA profiling by high throughput sequencing (7)
DNA-seq (7)
Methylation profiling by high throughput sequencing (6)
Observational (5)
RNA-seq of total RNA (4)
Transcription profiling by SAGE (3)
ChIP-chip by tiling array (3)
Cell line - One-color microarray (3)
MicroRNA profiling by high-throughput sequencing (2)
Human - High-throughput sequencing (2)
ATAC-seq (2)
Proteomic profiling by array (2)
One-color microarray (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Genotyping by high throughput sequencing (1)

Release Date

2013 (199)
2012 (185)
2014 (166)
2011 (164)
2015 (160)
2010 (150)
2016 (81)
2008 (76)
2009 (55)
2022 (39)
2021 (39)
2018 (38)
2023 (36)
2020 (35)
2025 (31)
2007 (31)
2017 (28)
2019 (23)
2024 (16)
2005 (14)
2026 (9)
2006 (8)
2003 (1)
2002 (1)
2004 (1)

Lab affiliation

Brown University (1)
Département d’Immunologie et Biologie Cellulaire, Faculté de Médecine et des Sciences de la Santé, Université de Sherbrooke, Sherbrooke, Québec, Canada, (1)
Head of Laboratory of Neuro-Oncology, Neurology, Clinical & Cancer Proteomics (1)
Vice Director, Professor Novo Nordisk Foundation Center for Protein Research Proteomics Program University of Copenhagen Faculty of Health and Medical Sciences Blegdamsvej 3b DK-2200 Copenhagen Denmark (1)

Location

Israel (2)
Italy (2)
United States (2)
Australia (1)
Netherlands (1)

Keyword

Erythromycin (2)
Erythromycin Estolate (2)
Erythromycin Ethylsuccinate (2)
Erythromycin stearate (2)
APC gene (2)
Nonsense mutations (2)
Familial Adenomatous Polyposis (FAP). (1)
Mismatch repair (1)
Probe-based imaging of GI pre-malignant or malignant lesions (1)
Immunohistochemistry (1)
Colon capsule endoscopy (1)
CT-colonography (1)
Incomplete colonoscopy (1)
Patients (1)
Familial Adenomatous Polyposis (FAP) (1)
Azithromycin (1)
Azithromycin Familial Adenomatous Polyposis (FAP) APC gene nonsense mutations (1)

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Deterministic evolution and stringent selection during pre-neoplasia

PRJNA951465 | ENA

Deterministic evolution and stringent selection during pre-neoplasia

PRJNA951466 | ENA

Association of Genital Infections Other Than Human Papillomavirus with Pre-Invasive and Invasive Cervical Neoplasia.

Not available

S-EPMC4800637 | biostudies-literature

A New Model of Gastric Pre-neoplasia Induced by Aberrant ADAR1-mediated Double-stranded RNA Signaling.

Not available

S-EPMC12810565 | biostudies-literature

Cell-lineage heterogeneity and driver mutation recurrence in pre-invasive breast neoplasia.

Not available

S-EPMC4410742 | biostudies-literature

Indoleamine 2,3-Dioxygenase 1, Increased in Human Gastric Pre-Neoplasia, Promotes Inflammation and Metaplasia in Mice and Is Associated With Type II Hypersensitivity/Autoimmunity.

Not available

S-EPMC5742059 | biostudies-literature

Deterministic evolution and stringent selection during pre-neoplasia

PRJNA838456 | ENA

Results of a two-phased clinical study evaluating a new multiband mucosectomy device for early Barrett's neoplasia: a randomized pre-esophagectomy trial and a pilot therapeutic pilot study.

Not available

S-EPMC6684496 | biostudies-literature

Determining the accuracy of non-invasive biomarkers for detecting pre-cancerous colorectal neoplasia

Interventions: This study will discover and develop novel blood & stool biomarkers. Biomarkers will be evaluated for both their ability and acceptability to detect inflammation, adenomas, and cancer in patients with gastrointestinal symptoms. The development of new screening tests will help guide do...

2470886 | ecrin-mdr-crc

MRI contrast enhancement of liver pre-neoplasia using iron-tannic nanoparticles.

Not available

S-EPMC9056925 | biostudies-literature

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