Proteolysis-resistant proteins

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Unknown (135)
Transcriptomics (44)
Proteomics (38)
Genomics (9)
Metabolomics (2)
Multiomics (1)

Organisms

Homo sapiens (22)
Andropogon gerardi (20)
Bacteria (20)
Borrelia (20)
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Canis lupus familiaris (20)
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Japanese encephalitis virus group (20)
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cellular organisms (1)
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Caenorhabditis elegans (1)

Organisms

Heliothis virescens (1)
Mus musculus (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (44)
pride (20)
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Disease

Colon cancer (3)
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Plasmodium berghei CTRP knockout strain (Dessens et al., 1999) infection (1)
Age related macular degeneration (1)
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Technology Type

Mass Spectrometry (20)
Shotgun proteomics (16)
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Bottom-up proteomics (2)
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Instrument Platform

Q Exactive (5)
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Publication Date

2022 (10)
2023 (9)
2016 (6)
2010 (6)
2020 (6)
2015 (5)
2014 (5)
2012 (5)
2008 (4)
2007 (4)
2025 (4)
2026 (4)
2021 (3)
2011 (3)
2009 (3)
2024 (3)
2018 (2)
2017 (2)
2006 (1)
2005 (1)
2019 (1)

UNIPROT ID/AC

A0A9S2 (1)
A1X3T7 (1)
A2V8C3 (1)
A3QM97 (1)
A3QMB9 (1)
A3QMC5 (1)
A3QMC8 (1)
A4UVK2 (1)
A4UVL1 (1)
A5A8P5 (1)
A5A8Q9 (1)
A5HJZ7 (1)
A5HU97 (1)
A5HU98 (1)
A5HWB2 (1)
A5JYR8 (1)
A5JYT3 (1)
A5JYU1 (1)
A5JYU5 (1)
A5JYX3 (1)
A5JYX4 (1)
A5JYX8 (1)
A5JYX9 (1)
A5PEW5 (1)
A5PEX5 (1)
A5PEY0 (1)
A5PEY3 (1)
A5Z2S2 (1)
A5Z2S4 (1)
A5Z2T4 (1)

CHEBI ID

CHEBI:60784 (1)
CHEBI:140004 (1)
CHEBI:133090 (1)
CHEBI:57345 (1)
CHEBI:16155 (1)
CHEBI:62501 (1)
CHEBI:35850 (1)
CHEBI:15375 (1)
CHEBI:47191 (1)
CHEBI:23858 (1)
CHEBI:136286 (1)
CHEBI:76614 (1)
CHEBI:84197 (1)
CHEBI:76616 (1)
CHEBI:57562 (1)
CHEBI:65097 (1)
CHEBI:57987 (1)
CHEBI:50321 (1)
CHEBI:133138 (1)
CHEBI:83914 (1)
CHEBI:88453 (1)
CHEBI:88497 (1)
CHEBI:36252 (1)
CHEBI:58083 (1)
CHEBI:63131 (1)
CHEBI:79550 (1)
CHEBI:90745 (1)
CHEBI:15243 (1)
CHEBI:78248 (1)
CHEBI:106363 (1)

Metabolite Name

2-methylbutyrylglycine (2)
2'-deoxycytidine (2)
N-acetylvaline (2)
3-methoxytyrosine (2)
UDP-N-acetylgalactosamine (1)
Tricosenoate (23:1) (1)
Sphingomyelin (d18:2/14:0, d18:1/14:1)* (1)
Sphingomyelin (d18:1/15:0, d16:1/17:0)* (1)
S-nitrosoglutathione (GSNO) (1)
Mesaconate (methylfumarate) (1)
Isovaleryl CoA (1)
Isobar: fructose 1,6-diphosphate, glucose 1,6-diphosphate, myo-inositol 1,4 or 1,3-diphosphate (1)
Diadenosine triphosphate (1)
Behenate (22:0)* (1)
Alpha-CEHC sulfate (1)
7-hydroxycholesterol (alpha or beta) (1)
1-stearoyl-GPG (18:0) (1)
1-stearoyl-2-oleoyl-GPI (18:0/18:1)* (1)
1-palmitoyl-GPS (16:0)* (1)
1-palmitoyl-3-linoleoyl-glycerol (16:0/18:2)* (1)
1-palmitoyl-2-oleoyl-GPS (16:0/18:1) (1)
1-palmitoyl-2-gamma-linolenoyl-GPC (16:0/18:3n6)* (1)
1-palmitoyl-2-alpha-linolenoyl-GPC (16:0/18:3n3)* (1)
1-palmitoleoyl-3-oleoyl-glycerol (16:1/18:1)* (1)
1-palmitoleoyl-2-oleoyl-GPC (16:1/18:1)* (1)
1-palmitoleoyl-2-oleoyl-glycerol (16:1/18:1)* (1)
1-palmitoleoyl-2-linoleoyl-GPC (16:1/18:2)* (1)
1-oleoyl-GPS (18:1) (1)
1-oleoyl-3-linoleoyl-glycerol (18:1/18:2) (1)
1-margaroylglycerol (17:0) (1)

First Public Date

2023 (2)
2024 (1)
2017 (1)
2015 (1)

Study type

Transcription profiling by array (27)
RNA-seq of coding RNA (5)
ChIP-seq (3)
Unknown experiment type (1)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of total RNA (1)

Release Date

2022 (13)
2021 (13)
2010 (13)
2020 (13)
2016 (12)
2017 (11)
2012 (11)
2014 (10)
2007 (9)
2025 (9)
2023 (9)
2015 (8)
2011 (6)
2009 (6)
2008 (6)
2024 (6)
2019 (5)
2018 (4)
2006 (4)
2001 (3)
2005 (2)
2013 (2)
1998 (2)
2000 (1)
1999 (1)

Lab affiliation

1) CNRS - ITAV USR3505, 31106 Toulouse, France 2) Nova Medical School, CEDOC- Chronic Diseases, 1150-082, Lisboa, Portugal (1)
1Department of Food Characterization, Quality and Safety, Institute of Food Science, Technology and Nutrition (ICTAN-CSIC), Madrid, Spain (1)
Cancer Biology, Fox Chase Cancer Center, Philadelphia, Pennsylvania, United States (1)
Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain (1)
Chair of Proteomics and Bioanalytics Technical University of Munich Germany (1)
Cleveland Clinic Lerner Research Institute (1)
Department of Biochemistry University of Cambridge (1)
Department of Biological Sciences Department of Chemistry & Biochemistry University of Delaware Newark DE, 19716 (1)
Department of Biotechnology, Yonsei University, Seoul 03722, South Korea (1)
Facility for Proteomics and Mass Spectrometry Max-Planck Insitute for Terrestrial Microbiology 35043 Marburg/Germany (1)
Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical School (1)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland (1)
Institute of Pharmacology and Toxicology RWTH Aachen University Wendlingweg 2 52074 Aachen, Germany (1)
Institute of Physiology, University of Zurich, 8057 Zurich, Switzerland (1)
Lerner Research Institute, Cleveland Clinic (1)
Professor of Chemistry Department of Chemistry Duke University (1)
Sorbonne Université UMS PASS P3S core facility (1)
The Sun Yat-sen Memorial Hospital of the Sun Yat-sen University (1)
V.L. Talrose Institute for Energy Problems of Chemical Physics, N.N. Semenov Federal Research Center of Chemical Physics, Russian Academy of Sciences, 119334 Moscow, Russia (1)
Vall d'Hebron Institute of Oncology (VHIO) (1)

Tags

xref:PubMed:37452023 (2)
xref:PubMed:30647404 (1)
xref:PubMed:28042144 (1)
xref:PubMed:28872766 (1)

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Circulating SOD2 is a Response Biomarker for Neoadjuvant Therapy in Breast Cancer

There is a great need of non-invasive tools that inform of an early molecular response to cancer therapeutic treatment. Here, we have tested the hypothesis that proteolytically resistant proteins could be candidate circulating tumor biomarkers for cancer therapy. Proteins resistant to proteolysis ar...

ORGANISM(S): Homo sapiens (Human)

2023-01-09 | PXD032359 | Pride

Targeting androgen receptor and the variants by an orally bioavailable Proteolysis Targeting Chimeras compound in castration resistant prostate cancer.

Not available

S-EPMC10011747 | biostudies-literature

Energetics-based protein profiling on a proteomic scale: identification of proteins resistant to proteolysis.

Not available

S-EPMC2857998 | biostudies-literature

RNA-seq differential expression analysis of tmRNA (ssrA) mutants in the genome-reduced bacterium Mycoplasma pneumoniae

We used a combination of genetic and proteomic approaches to characterize tmRNA (ssrA) activity in the genome-reduced bacterium Mycoplasma pneumoniae. For this, we generated tmRNA mutants encoding a tag resistant to proteolysis. Endogenous protein tagging by the mutant tmRNA gene (ssrAmk) was then e...

ORGANISM(S): Mycoplasma pneumoniae

2021-08-09 | E-MTAB-10111 | biostudies-arrayexpress

Analysis of surface-exposed outer membrane proteins in Helicobacter pylori.

Not available

S-EPMC4054173 | biostudies-literature

Structural disorder and induced folding within two cereal, ABA stress and ripening (ASR) proteins.

Not available

S-EPMC5686140 | biostudies-literature

Cdk1 regulates centrosome separation by restraining proteolysis of microtubule-associated proteins.

Not available

S-EPMC1478175 | biostudies-literature

Thermostable exoshells fold and stabilize recombinant proteins.