Proteomic phenotyping

Show results for

Unknown (119)
Proteomics (47)
Genomics (23)
Transcriptomics (15)
Genomic (3)
Metabolomics (2)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (37)
Andropogon gerardi (37)
Bacteria (37)
Bartonella quintana JK 31 (37)
Burkholderia ubonensis MSMB22 (37)
Canis lupus familiaris (37)
Cnidaria (37)
Ectopseudomonas oleovorans CECT 5344 (37)
Ensifer adhaerens (37)
Halictus scabiosae (37)
Human immunodeficiency virus 1 (37)
Mesocricetus auratus (37)
Miscanthus x giganteus (37)
Morchella importuna (37)
Mus musculus (37)
Panicum virgatum (37)
Pseudomonas aeruginosa PA103 (37)
Pseudomonas aeruginosa SJTD-1 (37)
Rabies virus Nishigahara RCEH (37)
Rattus norvegicus (37)
Rattus rattus (37)
Rhodococcus jostii RHA1 (37)
Rhodopseudomonas palustris (37)
Sorghastrum nutans (37)
Streptococcus dysgalactiae subsp. equisimilis SK1249 (37)
Homo sapiens (15)
Mus musculus (6)
Clostridium autoethanogenum (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)

Organisms

Homo sapiens (11)
Mus musculus (2)
Clostridium autoethanogenum (1)
Sus scrofa (1)
Saccharomyces cerevisiae (1)

Repository

pride (37)
ENA (19)
geo (13)
MassIVE (4)
biostudies-arrayexpress (3)
dbGaP (3)
EGA (3)
jPOST (2)
MetaboLights (2)
PAXDB (2)
iProX (1)
PanoramaPublic (1)

Tissue

Brain (8)
Cell culture (7)
Blood plasma (4)
Epithelial cell (4)
Skin (4)
Liver (3)
Melanocyte (3)
Colon (2)
Hepatocyte (2)
Kidney (2)
Mature astrocyte (2)
Skeletal muscle (2)
B cell (1)
Blood cell (1)
Breast cancer cell line (1)
Brown adipose tissue (1)
Cerebrospinal fluid secreting cell (1)
Chondrocyte (1)
Epididymis (1)
Erythrocyte (1)
Eye (1)
Glutamatergic neuron (1)
Heart (1)
Immature microglial cell (1)
Islet of Langerhans (1)
Kidney epithelial cell (1)
Knee (1)
Lung (1)
Lymphoblastoid cell line (1)
T cell (1)

Disease

Atypical teratoid rhabdoid tumor (2)
Breast cancer (2)
Skin melanoma (2)
Colon cancer (1)
Glioblastoma (1)
Hydrocephalus (1)
Lysosomal storage disease (1)
Malignant neoplasm of ovary (1)
Maturity-onset diabetes of the young type 1 (1)
Melanoma (1)
Niemann-Pick disease type C2 (1)
Osteoarthritis (1)
Ulcerative colitis (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (37)
Shotgun proteomics (22)
Bottom-up proteomics (8)
Data-dependent acquisition (5)
Data-independent acquisition (3)
SWATH MS (2)
NMR spectroscopy (1)
Mass spectrometry assay (1)
Gel-based experiment (1)
HDMSE (1)
Mass spectrometry imaging (1)
Top-down proteomics (1)

Instrument Platform

NextSeq 2000 (1)
Illumina NovaSeq 6000 (1)
Orbitrap Fusion Lumos (1)
Q Exactive HF-X (1)
Q Exactive Plus (1)
TripleTOF 6600 (1)
Nuclear Magnetic Resonance (NMR) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2021 (13)
2024 (11)
2025 (8)
2026 (7)
2023 (6)
2018 (5)
2022 (4)
2020 (3)
2014 (2)
2016 (1)
2019 (1)
2017 (1)
2015 (1)

UNIPROT ID/AC

1433G_MOUSE (2)
1433Z_MOUSE (2)
A1AG1_MOUSE (2)
A1AT1_MOUSE (2)
A1AT2_MOUSE (2)
A1AT4_MOUSE (2)
A1AT5_MOUSE (2)
A2AP_MOUSE (2)
ABRAL_MOUSE (2)
ACBP_MOUSE (2)
ACTB_MOUSE (2)
ACTC_MOUSE (2)
ACTN1_MOUSE (2)
ACTN4_MOUSE (2)
ADH1_MOUSE (2)
AL1A1_MOUSE (2)
ALBU_MOUSE (2)
ALDOA_MOUSE (2)
ALDOB_MOUSE (2)
ALS_MOUSE (2)
AMBP_MOUSE (2)
AMPL_MOUSE (2)
ANT3_MOUSE (2)
APEH_MOUSE (2)
APOA1_MOUSE (2)
APOA2_MOUSE (2)
APOA4_MOUSE (2)
APOB_MOUSE (2)
APOC1_MOUSE (2)
APOE_MOUSE (2)

CHEBI ID

CHEBI:17992 (2)
CHEBI:16344 (2)
CHEBI:17126 (2)
CHEBI:16797 (2)
CHEBI:17234 (2)
CHEBI:28300 (2)
CHEBI:18257 (2)
CHEBI:37084 (2)
CHEBI:16708 (2)
CHEBI:17724 (2)
CHEBI:30794 (2)
CHEBI:17497 (2)
CHEBI:16354 (2)
CHEBI:17750 (2)
CHEBI:15891 (2)
CHEBI:27480 (2)
CHEBI:43355 (2)
CHEBI:32806 (2)
CHEBI:15318 (2)
CHEBI:16135 (2)
CHEBI:18012 (2)
CHEBI:32816 (2)
CHEBI:32805 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:15724 (2)
CHEBI:17368 (2)
CHEBI:30769 (2)
CHEBI:132950 (1)
CHEBI:21519 (1)

Metabolite Name

N,N-Dimethylglycine (2)
Taurine (2)
Glucose (2)
Adenine (2)
Sucrose (2)
Creatinine (2)
Creatine (2)
Tartrate (1)
Methylsuccinate (1)
Guanidoacetate (1)
3-Indoxylsulfate (1)
2-Hydroxyisobutyrate (1)
L-Glutathione oxidized (1)
N-Acetylglucosaminylasparagine (1)
N-Acetyl--D-glucosamine 1-phosphate (1)
13S-Hydroxyoctadecadienoic acid (1)
-Linolenic acid (1)
Alpha-D-Glucose 1-phosphate (1)
Alpha-D(+)Mannose 1-phosphate (1)
N-Acetyl-tryptophan (1)
(+)-Pantothenic acid (1)
Beta-Hydroxylauric acid (1)
D-Panthenol (1)
Diethyladipate (1)
Dimethyl suberate (1)
L-Cysteine S-sulfate (1)
D-Galactonic acid (1)
D-(+)-Galacturonic acid (1)
D-Galacturonic acid (1)
Hippuric acid methyl ester (1)

First Public Date

2021 (5)
2026 (3)
2024 (3)
2025 (2)
2022 (2)
2019 (2)
2023 (1)
2020 (1)

Classification

bacteria (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (1)
RNA-seq of coding RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (22)
2022 (15)
2021 (15)
2024 (14)
2023 (8)
2020 (8)
2026 (7)
2019 (7)
2017 (7)
2018 (5)
2015 (4)
2016 (3)
2013 (3)
2009 (2)
2014 (1)
2012 (1)

Lab affiliation

Discovery Proteomics Facility, University of Oxford (2)
1. Division of Experimental Medicine, McGill University, Montreal, QC 2. Segal Cancer Proteomics Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 3. Department of Pathology, Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, McGill University, Montreal, QC 4. Segal Cancer Centre, Lady Davis Institute for Medical Research, Jewish General Hospital, Montreal, QC 5. Department of Oncology, McGill University, Montreal, QC (1)
1Research Unit Protein Science and Metabolomics and Proteomics Core, Helmholtz Zentrum München, German Research Center for Environmental Health, D-85764 Neuherberg, Germany (1)
Associate Professor, Department of Neurology, Yale University School of Medicine (1)
Australian Proteome Analysis Facility (APAF) Dept. Chemistry & Biomolecular Sciences Macquarie University, Sydney , NSW, Australia (1)
Australian Proteome Analysis Facility, Macquarie University, Sydney, Australia (1)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (1)
Centre de Recherches INRA Val de Loire UMR INRA85-CNRS7247-UFR-IFCE Plate-forme d'Analyse Intégrative des Biomolécules 37380 Nouzilly (1)
Department of Analytical Chemistry, University of Vienna, Vienna, Austria Joint Metabolome Facility, University of Vienna & Medical University of Vienna, Vienna, Austria (1)
Department of Cell Biology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA. (1)
Department of Neurology, The Second Affiliated Hospital (Xinqiao Hospital), Army Medical University (Third Military Medical University), Chongqing 400037, China (1)
Department of Neurology, Yale University, New Haven, CT, USA (1)
Department of Neuroscience, Intellectual and Developmental Disabilities Research Center, Washington University School of Medicine, St. Louis, MO, 63110, USA (1)
Department of Neurosurgery and Institute for NeurosciencesUniversity Hospital of Toulouse, Toulouse, France. Toulouse NeuroImaging Center (ToNIC), University of Toulouse, INSERM, UPS, Toulouse, France. (1)
Division of Pharmacology and Toxicology, Department of Pharmaceutical Sciences, University of Vienna, 1090 Vienna, Austria (1)
ERA Chair in Gas Fermentation Technologies, Institute of Technology, University of Tartu, Tartu, Estonia (1)
Functional Proteomics Laboratory, Department of Science and Technology, Federal University of Sao Paulo, UNIFESP, Sao Jose dos Campos, Sao Paulo, Brazil (1)
INRAE-Nouzilly-PRC (1)
Institute for the Animal Production System in the Mediterranean Environment (ISPAAM), National Research Council, 80055 Portici, Italy. (1)
Institute of Experimental Genetics, Helmholtz Zentrum München, German Research Center for Environmental Health Neuherberg, Germany (1)
Karolinska Institutet, Stockholm, Sweden (1)
Leibniz – Institut für Analytische Wissenschaften - ISAS - e.V., Otto-Hahn-Str.6b 44227 Dortmund, Germany phone: +49 231 1392-4143 fax: +49 231 1392-4850 http://www.isas.de (1)
Medical University of Vienna / Department of Dermatology / Head of Skin & Endothelium Research Division (SERD) (1)
Neuroproteomics Group Department of Molecular Neurobiology Max Planck Institute for Multidisciplinary Sciences Hermann-Rein-Str. 3 37075 Goettingen Germany (1)
Normandie Université, UNICAEN, INRAE, UMR 950 EVA, SFR Normandie Végétal (FED4277), 14000 Caen, France (1)
Nutrigenomics and Fish Growth Endocrinology Group, Institute of Aquaculture Torre de la Sal, IATS-CSIC, Spain (1)
Proteomics and Signal Transduction Max Planck Institute of Biochemistry Am Klopferspitz 18 82152 Martinsried (1)
Proteomics, Leibniz-Institut für Analytische Wissenschaften-ISAS-e.V., Dortmund, Germany (1)
School of Life and Enviromental Sciences, Charles Perkins Centre, The University of Sydney (1)
Spatial Proteomics Max Delbrück Center Robert-Rössle-Straße 10 13125 Berlin, Germany (1)

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ProMetIS, deep phenotyping of mouse models by combined proteomics and metabolomics analysis

Genes are pleiotropic and getting a better knowledge of their function requires a comprehensive characterization of their mutants. Here, we generated multi-level data combining phenomic, proteomic and metabolomic acquisitions from plasma and liver tissues of two C57BL/6 N mouse models lacking the...

2021-09-01 | MTBLS1903 | MetaboLights

Data independent MS phenotyping of melanoma tissue specimens

Phenotyping of Stage III BRAF or NRAS mutant melanoma tissue specimens to predict drug response and patient survival

ORGANISM(S): Homo sapiens (Human)

2018-10-11 | PXD007083 | Pride

Data independent MS phenotyping of patient derived melanoma cell lines

Phenotyping of patient derived Stage III and IV melanoma cell lines to predict drug response

ORGANISM(S): Homo sapiens (Human)

2018-10-11 | PXD002725 | Pride

Human Melanoma Swath Drug resistance

Proteomic phenotyping of metastatic melanoma reveals putative signatures of MEK inhibitor response and prognosis.

Not available

S-EPMC6173697 | biostudies-literature

Deep phenotyping of Post-infectious Myalgic Encephalomyelitis/Chronic Fatigue Syndrome [Protein]

PRJNA1055468 | ENA

Quick microbial molecular phenotyping by differential shotgun proteomics.

Not available

S-EPMC7496289 | biostudies-literature

Proteomic analysis of urine reveals biomarkers for the diagnosis and phenotyping of abdominal-type Henoch-Schonlein purpura.

Not available

S-EPMC8039785 | biostudies-literature

Proteomic phenotyping of stimulated Müller cells uncovers profound pro-inflammatory signaling and antigen-presenting capacity

Müller cells are the main macroglial cells of the retina exerting a wealth of functions to maintain retinal homoeostasis. Upon pathological changes in the retina, they become gliotic with both protective and detrimental consequences. Accumulating data also provide evidence for a pivotal role of Müll...

ORGANISM(S): Homo sapiens (Human) Sus scrofa domesticus (domestic pig)

2022-02-16 | PXD028390 | Pride

Pro-inflammatory Complement system Cytokines. retina Immune response Müller cells Atypical antigen-presenting cell Diabetic retinopathy

Multimodal immune phenotyping of maternal peripheral blood in normal human pregnancy.

Not available

S-EPMC7205264 | biostudies-literature

High-Dimensional Phenotyping Identifies Age-Emergent Cells in Human Mammary Epithelia.

Not available

S-EPMC5946804 | biostudies-literature

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209 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Classification

Modification

Study type

Release Date

Lab affiliation

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