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Proteomicspseudomonas fluorescens LC-MSMS
our work revealed a rewired regulatory network of mqsA in P. fluoresces, in which a new transcription factor is recruited and incorporated to fulfill the similar physiological function.
ORGANISM(S): Pseudomonas fluorescens F113 
2019-01-30 | PXD008578 | Pride
Pseudomonas fluorescens lc-msms proteomics 
ProteomicsOuter membrane vesicles catabolize lignin-derived aromatic compounds in Pseudomonas putida KT2440
Lignin modifications and the exoproteome of three aromatic catabolic bacteria: Pseudomonas putida KT2440, Rhodoccocus jostii RHA1, and Amycolatopsis sp. ATCC 39116. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MSGF+ and abundances inferred using PNNL's DMS an...
ORGANISM(S): Pseudomonas Putida Kt2440 (ncbitaxon:160488) Amycolatopsis Sp. Atcc 39116 (ncbitaxon:385957) Rhodococcus Jostii Rha1 (ncbitaxon:101510) 
2019-11-01 | MSV000084524 | MassIVE
Proteomics15N Limitation of detection in Pseudomonas fluorescens
The limit of 15N detection in proteins of Pseudomonas putida was studied by LC-MS/MS. Cells were grown in the presence of 0.1%15N to 10% 15N.The method of protein-based stable isotope probing (protein-SIP) has previously been shown to allow the modeling of carbon fluxes in microbial communities, dem...
ORGANISM(S): Pseudomonas fluorescens 
2013-04-09 | PXD000127 | Pride
Protein-sip 15n Lc-msms 
ProteomicsProteomic analyses of bacterial growth using fungal biomass or fungal cell wall polysaccharides
This study was a proteomic and secretomic survey of the Gram-negative saprophytic bacterium Cellvibio japonicus during growth using fungal polysaccharides or authentic fungal biomass as a sole nutrient source. The purified polysaccharides were beta-glucan (derived from yeast) and alpha chitin (deriv...
ORGANISM(S): Cellvibrio Japonicus (ncbitaxon:155077) 
2024-11-26 | MSV000096529 | MassIVE
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