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TranscriptomicsLarge scale sequencing of viroid derived small RNA in Potato spindle tuber viroid infected tomato plants
In order to analyze the production of small RNA (sRNA) by viroids upon infecting the plants, the tomato plants (Lycopersicum esculentum cv. Rutgers) were inoculated with the variants of Potato spindle tuber viroid (PSTVd). After 21-days of post inoculation, total RNA was extracted and subjected for ...
ORGANISM(S): Solanum lycopersicum 
2015-05-27 | E-GEOD-69225 | biostudies-arrayexpress
TranscriptomicsInsight on genes affecting tuber development in potato upon Potato spindle tuber viroid (PSTVd) infection
Potato (Solanum tuberosum L) is a natural host of Potato spindle tuber viroid (PSTVd) which can cause characteristic symptoms on developing plants including stunting phenotype and distortion of leaves and tubers. PSTVd is the type species of the family Pospiviroidae, it can replicate in the nucleus ...
ORGANISM(S): Solanum tuberosum 
2016-02-01 | E-MTAB-3869 | biostudies-arrayexpress
GenomicsDegradome analysis in PSTVd-infected plants
Degradome analysis of PSTVd-infected tomato and N.benthamiana plants
PRJEB42233 | ENA
ProteomicsRevisiting non-coding nature of viroids
Viroids are small circular highly structured pathogens infecting a broad range of plants, caus-ing economic losses. Since their discovery in the 70s, they have been considered as non-coding pathogens. In the last few years the discovery of other RNA entities, similar in terms of size and structure, ...
ORGANISM(S): Nicotiana benthamiana 
2022-02-17 | PXD030755 | Pride
Viroid Non-coding rna Pstvd Mass spectrometry Cirrna Translation 
GenomicsInvestigating epigenetic phenomena in PSTVd infected Nicotiana benthamiana plants
Study of DNA methylation changes upon PSTVd infection of N. benthamiana
PRJEB64208 | ENA
UnknownXanthohumol and echinocystic acid induces PSTVd tolerance in tomato.
Not available
S-EPMC11190350 | biostudies-literature
GenomicsLarge scale sequencing of PSTVd-RG1 sRNA in tomato plants
In order to analyze the production of small RNA (sRNA) by Potato spindle tuber viroid- RG1 strain (PSTVd-RG1) upon infecting the plants, the tomato plants (Lycopersicum esculentum cv. Rutgers) were inoculated with the PSTVd-RG1. After 21-days of post inoculation, total RNA was extracted and subjecte...
ORGANISM(S): Potato spindle tuber viroid 
2017-09-20 | GSE70166 | GEO
GenomicsLarge scale sequencing of PSTVd-I sRNA in tomato plants
In order to analyze the production of small RNA (sRNA) by Potato spindle tuber viroid-intermediate strain (PSTVd-I) upon infecting the plants, the tomato plants (Lycopersicum esculentum cv. Rutgers) were inoculated with the PSTVd-I. After 21-days of post inoculation, total RNA was extracted and subj...
ORGANISM(S): Potato spindle tuber viroid 
2017-09-20 | GSE70096 | GEO
UnknownTOR Inhibition Enhances Autophagic Flux and Immune Response in Tomato Plants Against PSTVd Infection.
Not available
S-EPMC11660016 | biostudies-literature
UnknownChloroplast clustering around the nucleus induced by OMP24 overexpression unexpectedly promoted PSTVd infection in Nicotiana benthamiana.
Not available
S-EPMC10632781 | biostudies-literature
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