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TranscriptomicsRNA at 92 M-BM-0C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi.
The non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi is investigated using the RNA-seq technology. A dedicated computational pipeline analyzes RNA-seq reads and prior genome annotation to identify small RNAs, untranslated regions of mRNAs, and cis-encoded antisense transc...
ORGANISM(S): Pyrococcus abyssi 
2014-05-31 | E-GEOD-58131 | biostudies-arrayexpress
GenomicsPyrococcus abyssi
Origin of replication for Pyrococcus abyssi by ChIP-chip
PRJNA95265 | ENA
GenomicsPyrococcus abyssi
RNA at 92 °C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi.
PRJNA249078 | ENA
ProteomicsProtein partners identification in Pyrococcus abyssi by nanoLC-MSMS
Recombinant aRNase J from P. abyssi, with C-terminal (His)6-tag (aRNase J-His), was produced, purified and used as baits for AP-MS experiments. In order to discriminate specific protein interaction from column background, we performed mock AP-MS analyses with P. abyssi cell extracts in absence of pr...
ORGANISM(S): Pyrococcus abyssi 
2020-01-21 | PXD015856 | Pride
Pull-down Nanolc-msms Pyrococcus abyssi 
GenomicsPyrococcus abyssi
Hyperthermophilic archaeon
PRJNA35117 | ENA
GenomicsOrigin of replication for Pyrococcus abyssi by ChIP-chip
Recent advances in the study of archaeal DNA replication have uncovered defined replication origins (oriC) and demonstrated specific binding of the Cdc6/Orc1 protein and Mcm helicase to oriC in vivo and/or in vitro. The oriC of the hyperthermophilic archaeon Pyrococcus abyssi is characterized by 13 ...
ORGANISM(S): Pyrococcus abyssi 
2008-01-01 | GSE4104 | GEO
TranscriptomicsRNA at 92 °C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi.
The non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssi is investigated using the RNA-seq technology. A dedicated computational pipeline analyzes RNA-seq reads and prior genome annotation to identify small RNAs, untranslated regions of mRNAs, and cis-encoded antisense transc...
ORGANISM(S): Pyrococcus abyssi 
2014-05-31 | GSE58131 | GEO
GenomicsPyrococcus abyssi GE5
Anaerobic hyperthermophilic archeon
PRJNA179 | ENA
ProteomicsA new family of ribosome hibernation factors in ArchaeaA new family of ribosome hibernation factors in Archaea
Ribosome hibernation preserves translation machinery during stress, yet its mechanisms in Archaea remain poorly defined. Here, we identify HibA, a previously unrecognized family of hibernation factors widespread in Archaea. HibA consists of a bacterial-like HPF/RaiA domain fused to a Cystathionine B...
ORGANISM(S): Pyrococcus abyssi GE5 
2026-03-24 | PXD073243 | Pride
Archaea Ribosome Hibernation 
UnknownConstruction of a shuttle vector for, and spheroplast transformation of, the hyperthermophilic archaeon Pyrococcus abyssi.
Not available
S-EPMC129897 | biostudies-literature
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