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TranscriptomicsTotal mRNA sequence dataset from Pectobacterium atrosepticum colonising potato or radish roots
Pectobacterium atrosepticum (Pba) is a gram-negative bacterium which causes blackleg and tuber soft rot on potato. To investigate the molecular processes and responses involved in Pba-host (potato) and Pba-non-host (radish) interactions, under laboratory conditions, we used total RNA-sequencing to ...
ORGANISM(S): Solanum tuberosum 
2024-01-17 | E-MTAB-13434 | biostudies-arrayexpress
GenomicsRadish germplasm resequencing
Resequencing data for radish germplasm
PRJEB44749 | ENA
ProteomicsProteome and metabolome alterations in radish (Raphanus sativus L.) seedlings induced by inoculation with Agrobacterium tumefaciens
Here we provide a comprehensive explorative proteomics survey aiming at intensive charac-terization of metabolic shifts and molecular events accompanying plant responses to inoculation with A. tumefaciens culture. Based on the comprehensive proteomics dataset complemented with an untargeted metaboli...
ORGANISM(S): Raphanus sativus 
2025-05-07 | PXD060463 | Pride
Radish Shotgun proteomics Agrobacterium tumefaciens Metabolic shifts Crown gall tumor Agrobacterium Raphanus sativus Agrobacterial infection 
UnknownCharacterization and Function Analysis of Soluble Dietary Fiber Obtained from Radish Pomace by Different Extraction Methods.
Not available
S-EPMC10818875 | biostudies-literature
GenomicsRadish leaf curl virus
Radish leaf curl virus overview
PRJNA69721 | ENA
UnknownGenome-wide identification and characterization of CONSTANS-like gene family in radish (Raphanus sativus).
Not available
S-EPMC6152963 | biostudies-literature
UnknownBioinformatics Analysis of the Lipoxygenase Gene Family in Radish (Raphanus sativus) and Functional Characterization in Response to Abiotic and Biotic Stresses.
Not available
S-EPMC6928601 | biostudies-literature
Genomics16s rRNA pyrosequencing of radish and brines
16s rRNA pyrosequencing of radish and brines Raw sequence reads
PRJNA631582 | ENA
TranscriptomicsGenome-wide analysis of the lncRNAs and miRNAs involved in flower development in radish
To further verify the differences in IncRNA and miRNA during radish flowering, we conducted transcriptome analysis on samples taken before and after radish flowering. Obtain IncRNA and miRNA from the differential table and perform qRT-PCR validation on them.
ORGANISM(S): Raphanus sativus 
2024-03-14 | GSE261303 | GEO
TranscriptomicsRNA-seqencing datasets for three different vernalization time course of radish
We report here NGS RNA-seqencing datasets for htree different vernalization time course of radish cultivar, "Taebaek".
ORGANISM(S): Raphanus sativus 
2021-08-31 | GSE182885 | GEO
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