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ProteomicsProteomic analysis of isolated murine neurons
Muscle isoform of fructose 1,6-bisphosphatase (FBP2) is a regulatory enzyme of glycogen synthesis from non-carbohydrates and a multifunctional protein indispensable for induction and maintenance of the long-term potentiation (the LTP), a molecular/cellular mechanism of memory formation in the hippoc...
ORGANISM(S): Rattus norvegicus (Rat) 
2026-01-24 | PXD038676 | Pride
Neuron Glyconeogenesis 
UnknownT-to-R switch of muscle fructose-1,6-bisphosphatase involves fundamental changes of secondary and quaternary structure.
Not available
S-EPMC4822563 | biostudies-literature
ProteomicsProteomics informed deconvolution of 3 cell lines
The project aimed to investigate the possibility to use proteomics data to deconvolute cell line proportions in mixed samples. Samples containing either HEK 293, Caco-2, or A549 cells and mixtures of the three cell lines was analysed using the total protein approach. This was then used for proteomic...
ORGANISM(S): Homo sapiens (Human) 
2023-10-24 | PXD027282 | Pride
Hek 293 A549 Caco-2 
UnknownEvolution of enzymatic activities in the enolase superfamily: galactarate dehydratase III from Agrobacterium tumefaciens C58.
Not available
S-EPMC4081050 | biostudies-literature
ProteomicsThe Hidden Culprit of Visceral Fat: Dysfunctional Subcutaneous Adipose Tissue – Serum proteomics
To investigate the proteomic profiles of paired subcutaneous adipose tissue (SAT) and visceral adipose tissue (VAT) samples, as well as their correlations with clinical traits in severely obese patients, and to identify potential serum protein markers associated with tissue expression or metabolic s...
ORGANISM(S): Homo sapiens (Human) 
2024-05-24 | PXD041750 | Pride
Adipose tissue  visceral adipose tissue  subcutaneous adipose tissue  obesity  proteomics  type 2 diabetes  serum proteomics 
ProteomicsComparative analysis of mouse muscles types
The dataset presents FASP- and LC-MS/MS-based analysis of whole lysates of tree types of mouse muscle tissue: white and red muscle fibers and heart muscle. The measurements were performed using five biological replicates for each tissue type. The dataset cover 7200 proteins. The data were used for ...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2020-02-07 | MSV000084934 | MassIVE
UnknownQuantitative analysis of the Escherichia coli proteome.
Not available
S-EPMC4459560 | biostudies-literature
TranscriptomicsExpression data from mouse B16-F10 cells exposed to hypoxic conditions in vitro.
Analysis of gene expression profile of B16-F10 murine melanoma cells exposed to hypoxic conditions (1% oxygen) or hypoxia mimicry (cobalt chloride) for 24 hours. Gene expression profiles were analyzed using MG-U74Av2 oligonucleotide microarrays. Data analysis revealed 2541 probesets (FDR<5%) for 1...
ORGANISM(S): Mus musculus 
2011-11-11 | E-GEOD-33607 | biostudies-arrayexpress
ProteomicsIntegrating Proteomics and Enzyme Kinetics Reveals Tissue-Specific Types of the Glycolytic and Gluconeogenic Pathways
Glycolysis is the core metabolic pathway supplying energy to cells. Whereas the vast majority of studies focus on specific aspects of the process, global analyses characterizing simultaneously all enzymes involved in the process are scarce. Here we demonstrate that quantitative label- and standard-f...
ORGANISM(S): Mus musculus (Mouse) 
2015-06-22 | PXD002156 | Pride
Gluconeogenesis Lysine acetylation Kcat -values Carbohydrate metabolism "total protein approach" Glycolysis Energy metabolism Quantitative proteomics "filter aided sample preparation" absolute protein quantitation 
OtherIntegrating Proteomics and Enzyme Kinetics Reveals Tissue-Specific Types of the Glycolytic and Gluconeogenic Pathways.
Data from ProteomeXchange, PXD ID: PXD002156. File: 20120523_EXQ4_JRW_SA_94_T_1.mzml. Published as part of J Proteome Res. 2015 Jun 16 . From the Abstract: {{i}} ...Results of our in-depth proteomic analysis of the mouse organs did not support the concepts of regulation of glycolysis by lysine acet...
ORGANISM(S): Mus_musculus_viruses, Mouse 
GPM11210039797 | GPMDB
Resource Reanalysis 
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