Sort   by:  
 Page size 
ProteomicsTrade-off between transcriptome plasticity and genome evolution in cephalopods
RNA editing by adenosine deamination is well-positioned to diversify proteomes, but it is infrequently used for this purpose. Recent reports have suggested that squid may be an exception. We show that extensive recoding by RNA editing is an invention of the behaviorally sophisticated coleoid cephalo...
ORGANISM(S): Doryteuthis pealeii 
2017-04-11 | PXD005827 | Pride
Rna modifications Cephalopods Adar Neural plasticity Genome evolution Rna editing Proteome diversity Epitranscriptome 
ProteomicsReadthrough Events in Plants Reveal Unprecedented Plasticity of Stop Codons
Stop codon readthrough (SCR) has important biological implications but remains largely uncharacterized. Here, we identify 1,009 SCR events in plants using a proteogenomic strategy. Plant SCR candidates tend to have shorter transcript lengths and fewer exons and splice variants than non-SCR transcrip...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) Glycine max Zea mays (Maize) Oryza sativa (Rice) 
2024-02-02 | PXD035958 | Pride
Proteogenomics Mass spectrometry Stop codon readthrough Recoding plasticity Amino acids Plants 
ProteomicsReadthrough Events in Plants Reveal Unprecedented Plasticity of Stop Codons
Stop codon readthrough (SCR) has important biological implications but remains largely uncharacterized. Here, we identify 1,009 SCR events in plants using a proteogenomic strategy. Plant SCR candidates tend to have shorter transcript lengths and fewer exons and splice variants than non-SCR transcrip...
ORGANISM(S): Glycine max Arabidopsis thaliana (Mouse-ear cress) Zea mays (Maize) Oryza sativa (Rice) 
2024-02-02 | PXD038762 | Pride
Proteogenomics Mass spectrometry Stop codon readthrough Recoding plasticity Amino acids Plants 
UnknownPhase information is conserved in sparse, synchronous population-rate-codes via phase-to-rate recoding.
Not available
S-EPMC10543394 | biostudies-literature
UnknownCrystallographic analyses illustrate significant plasticity and efficient recoding of meganuclease target specificity.
Not available
S-EPMC5737575 | biostudies-literature
UnknownLoss of CaV1.3 RNA editing enhances mouse hippocampal plasticity, learning, and memory.
Not available
S-EPMC9371748 | biostudies-literature
UnknownTrade-off between Transcriptome Plasticity and Genome Evolution in Cephalopods.
Not available
S-EPMC5499236 | biostudies-literature
UnknownEvolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors.
Not available
S-EPMC2867884 | biostudies-literature
UnknownHarnessing the Genetic Plasticity of Porcine Circovirus Type 2 to Target Suicidal Replication.
Not available
S-EPMC8473201 | biostudies-literature
UnknownLong-Term Synaptic Plasticity Tunes the Gain of Information Channels through the Cerebellum Granular Layer.
Not available
S-EPMC9775043 | biostudies-literature
Sort   by:  
 Page size