Sort   by:  
 Page size 
TranscriptomicsSignaling to Transcription Networks in the Neuronal Retrograde Injury Response
Retrograde signaling from axon to soma activates intrinsic regeneration mechanisms in lesioned peripheral sensory neurons; however, the links between axonal injury signaling and the cell body response are not well understood. Here, we used phosphoproteomics and microarrays to implicate ~900 phosphop...
ORGANISM(S): Rattus norvegicus 
2010-12-29 | E-GEOD-26350 | biostudies-arrayexpress
TranscriptomicsRetrograde bilin signaling enables Chlamydomonas greening and phototrophic survival
Here we show that the phytochrome-less chlorophyte Chlamydomonas reinhardtii retains a functional pathway to synthesize the linear tetrapyrrole (bilin) precursor of the phytochrome chromophore. Reverse genetic, metabolic inactivation and bilin rescue experiments establish that this pathway is needed...
ORGANISM(S): Chlamydomonas reinhardtii 
2013-01-10 | E-GEOD-40031 | biostudies-arrayexpress
GenomicsPeroxisomal retrograde signaling in C. elegans
Peroxisomal retrograde signaling in C. elegans
PRJNA657442 | ENA
TranscriptomicsSigma2 and Sigma6-mediated plastid retrograde signals control nuclear gene expression in Arabidopsis
Retrograde signaling from the chloroplast to the nucleus is necessary to regulate the chloroplast proteome during development and fluctuating environmental conditions. Although the specific chloroplast process(es) that must occur and the nature of the signal(s) that exits the chloroplast are not wel...
ORGANISM(S): Arabidopsis thaliana 
2012-09-18 | E-MTAB-4338 | biostudies-arrayexpress
TranscriptomicsRetrograde signalling during caused by heritable mitochondrial dysfunction is partly mediated by ANAC017 and improves plant performance.
Mitochondria are crucial for plant viability and are able to communicate information on their functional status to the cellular nucleus via retrograde signalling, thereby affecting gene expression. It is currently unclear if retrograde signalling in response to constitutive mitochondrial biogenesis ...
ORGANISM(S): Arabidopsis thaliana 
2016-07-28 | E-MTAB-4655 | biostudies-arrayexpress
TranscriptomicsExpression data from Arabidopsis thaliana seedlings with altered enzymes activity of the tetrapyrrole biosynthesis pathway
The CHLD and CHLM genes encode proteins involved in tetrapyrrole biosynthesis pathway. It was proposed that intermediates like magnesium protoporphyrin might play a role in retrograde plastid-to-nucleus signaling. In the present work we provide evidence that altered enzymes activity of the tetrapyrr...
ORGANISM(S): Arabidopsis thaliana 
2013-04-01 | E-GEOD-41884 | biostudies-arrayexpress
TranscriptomicsA Systems Approach for Decoding Mitochondrial Retrograde Signaling Pathways
The mitochondrial and nuclear genomes contribute to mitochondrial function, and when mitochondrial function is compromised, mitochondrial retrograde signaling alters nuclear gene expression. We performed gene expression profiling of engineered cells that had mitochondria containing a disease-associa...
ORGANISM(S): Homo sapiens 
2013-02-12 | E-GEOD-27545 | biostudies-arrayexpress
GenomicsDeconvoluting ACS1 retrograde signaling networks that regulate leaf development
Deconvoluting ACS1 retrograde signaling networks that regulate leaf development
PRJNA638809 | ENA
TranscriptomicsCommunication between mitochondria and nucleus: defining a retrograde response in fission yeast
Retrograde response was widely studied in budding yeast but the main transcription factors that transmit it (RTG1,2 and 3) are not conserved in other organisms, thus it is interesting to study how communication between mitochondria and nucleus evolved in distantly related fission yeast, and which ar...
ORGANISM(S): Schizosaccharomyces pombe 
2016-11-01 | E-MTAB-4520 | biostudies-arrayexpress
TranscriptomicsScaling proprioceptor gene transcription by retrograde NT3 signaling
Transcriptional analysis of identified DRG subpopulations. Cell-type specific intrinsic programs instruct neuronal subpopulations before target-derived factors influence later neuronal maturation. Retrograde neurotrophin signaling controls neuronal survival and maturation of dorsal root ganglion (DR...
ORGANISM(S): Mus musculus 
2012-08-23 | E-GEOD-38074 | biostudies-arrayexpress
Sort   by:  
 Page size