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ProteomicsProteome analysis of xylose metabolism in Rhodotorula toruloides during lipid production 
Our study is the first investigation of proteome of oleaginous yeast Rhotodorula toruloides during conversion of xylose into lipids. We performed comparative proteomics of R. toruloides during cultivation of two carbon sources: glucose and xylose. Proteome analysis revealed significantly lower level...
ORGANISM(S): Rhodotorula toruloides 
2019-08-08 | PXD012332 | Pride
Rhodotorula toruloides Lipid production Proteome Xylose 
ProteomicsGenome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloides
Rhodotorula toruloides is a non-conventional, oleaginous yeast able to naturally accumulate high amounts of microbial lipids. Constraint-based modeling of R. toruloides has been mainly focused on the comparison of experimentally measured and model predicted growth rates, while the analysis of intrac...
ORGANISM(S): Rhodotorula toruloides 
2023-03-13 | PXD037281 | Pride
Proteomics Rhodotorula toruloides Metabolic fluxes Multiple substrates Genome-scale model 
ProteomicsXylose Metabolism and the Effect of Oxidative Stress on Lipid and Carotenoid Production in Rhodotorula toruloides: Insights for Future Biorefinery
The use of cell factories to convert sugars from lignocellulosic biomass into chemicals in which oleochemicals and food additives, such as carotenoids, play an important role is essential for the shift towards sustainable processes. Rhodotorula toruloides is a yeast that naturally metabolises a wide...
ORGANISM(S): Rhodotorula toruloides 
2020-07-29 | PXD019305 | Pride
Absolute proteomics Genome-scale modelling Microbial oil Rhodotorula toruloides Biorefinery Xylose Carotenoids 
ProteomicsCorn stover variability drives differences in Rhodo conversion to SAF-Task 7-Okonkwo-2023-ABPDU
Discovery proteomics of R. toruloides strains' usage of corn stover variability study (ABPDU)
ORGANISM(S): Rhodotorula Toruloides (ncbitaxon:5286) 
2024-07-26 | MSV000095450 | MassIVE
TranscriptomicsMetabolic Rewiring by Acetate Promotes Efficient Xylose Utilization in Rhodotorula toruloides
To confirm the transcriptional mechanism of xylose gene activation in Rhodotorula toruloides is principally determined by acetate and not other factors, like nitrogen content. RNA-Seq was conducted to understand xylose pathway metabolism. Ultimately, we used new-found understanding in RNA-Seq to eng...
ORGANISM(S): Rhodotorula toruloides 
2026-02-07 | GSE286304 | GEO
GenomicsRhodotorula toruloides strain:IFO0880 pgi132
Rhodotorula toruloides IFO0880 pgi132 Resequencing
PRJNA580726 | ENA
GenomicsRhodotorula toruloides strain:Z11
Rhodotorula toruloides strain:Z11 Genome sequencing
PRJNA793160 | ENA
GenomicsRhodotorula toruloides NP11
Rhodotorula toruloides NP11 Transcriptome or Gene expression
PRJNA841362 | ENA
GenomicsRhodotorula toruloides strain:IFO0880 | isolate:IFO0880
Rhodotorula toruloides IFO0880 4508 DirectFromRhodo2 resequencing
PRJNA697996 | ENA
GenomicsRhodotorula toruloides strain:IFO0880 | isolate:IFO0880
Rhodotorula toruloides IFO0880 4508 DirectFromRhodo1 resequencing
PRJNA697995 | ENA
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