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TranscriptomicsThe global expression profile of Bacillus subtilis to the toxic carbonyls methylglyoxal (MG) and formaldehyde (FA)
Abstract of associated menuscript; Quinones and alpha,beta-unsaturated carbonyls are naturally occurring electrophiles that target cysteine residues via thiol-(S)-alkylation. We analyzed the global expression profile of Bacillus subtilis to the toxic carbonyls methylglyoxal (MG) and formaldehyde (FA...
ORGANISM(S): Bacillus subtilis 
2010-05-15 | E-GEOD-13925 | biostudies-arrayexpress
ProteomicsAn Orphan-Moonlighting Gene PRL-1 Enhances Photosynthetic Efficiency and Productivity in Plants
Increasing photosynthetic efficiency remains a major goal across the globe given its central role in CO2 assimilation. Here, we identified a nuclear genome-residing orphan gene, comprised of 3 exons, two with apparent endophytic origins and the third being a highly conserved fragment of the RIBULOSE...
ORGANISM(S): Populus Trichocarpa (ncbitaxon:3694) 
2023-04-24 | MSV000091785 | MassIVE
UnknownReversible association of ribulose-1, 5-bisphosphate carboxylase/oxygenase activase with the thylakoid membrane depends upon the ATP level and pH in rice without heat stress.
Not available
S-EPMC2892142 | biostudies-literature
UnknownFunctional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria.
Not available
S-EPMC10035430 | biostudies-literature
UnknownTargeted knockdown of ribulose-1, 5-bisphosphate carboxylase-oxygenase in rice mesophyll cells.
Not available
S-EPMC8090977 | biostudies-literature
UnknownRhodophyta DNA Barcoding: Ribulose-1, 5-Bisphosphate Carboxylase Gene and Novel Universal Primers.
Not available
S-EPMC10871077 | biostudies-literature
ProteomicsUnderstanding the genetic and structural bases of hornworts' carbon-concentrating mechanism
Proteomic measurements to identify putative Rubisco interacting proteins in hornworts compared to the green alga Chlamydomonas, the traditional model for studying pyrenoid-based CO2-concentrating mechanisms (pCCM). Using antibodies and immunoprecipitation against hornwort Rubisco large subunits to p...
ORGANISM(S): Anthoceros Agrestis (ncbitaxon:41834) 
2024-07-12 | MSV000095322 | MassIVE
MetabolomicsSuboxic DOM is bioavailable to surface prokaryotes in a simulated overturn of an oxygen minimum zone, Devil’s Hole, Bermuda
Oxygen minimum zones (OMZs) are expanding due to increased sea surface temperatures, subsequent increased oxygen demand through respiration, reduced oxygen solubility, and thermal stratification driven in part by anthropogenic climate change. Devil's Hole, Bermuda is a model ecosystem to study OMZ m...
2024-02-27 | MTBLS8122 | MetaboLights
TranscriptomicsOverexpression of non-degradable SAS-6 KEN box mutant in RPE-1 cells
Stable clones of RPE-1 cells expressing tetracycline-inducible wild type SAS-6 or SAS-6ND were obtained via lentiviral gene transduction with the pLVX tet-on Advanced inducible gene expression system (Clontech). Stable expressors were derived by selection with 5 μg/mL puromycin (Sigma-Aldrich, UK). ...
ORGANISM(S): Homo sapiens 
2025-01-27 | E-MTAB-13783 | biostudies-arrayexpress
ProteomicsCP12 controls ribulose 1,5 bisphosphate recycling and carbon acquisition in Chlamydomonas reinhardtii
The small chloroplastic protein CP12 has multiple functions, including the regulation of enzymes in the Calvin-Benson-Bassham cycle. Here, we investigated its role in the acclimation of Chlamydomonas reinhardtii to varying CO2 availability. This alga has a CO2 concentrating mechanism that increases ...
ORGANISM(S): Chlamydomonas reinhardtii 
2026-02-16 | PXD065761 | Pride
Chlamydomonas reinhardtii Pyrenoid Rubisco Co₂ concentrating mechanism Phosphoribulokinase Cp12 
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