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MetabolomicsViral lysis and host reprogramming impact carbohydrate, amino acid, and osmolyte cycling in salt marsh tidal creek sediments

Salt marshes are highly productive ecosystems where microbial communities drive key

transformations of organic matter at rates often exceeding those of oceanic and inland

environments. Viruses are recognised as important drivers and regulators of global

biogeochemical cycling, y...

2026-06-26 | MTBLS12630 | MetaboLights
Transcriptomicsbulk RNA-seq NOHA
Bulk RNA sequencing (bulk RNA-seq) data of the Neural Organoid Hormonal Atlas (NOHA). To investigate the impact of hormonal modulation on neurodevelopmental processes, we used neural organoids derived from two genetically validated human induced pluripotent stem cell (hiPSC) control lines (CTL08, ma...
ORGANISM(S): Homo sapiens 
2026-07-22 | E-MTAB-17185 | biostudies-arrayexpress
TranscriptomicsscRNAseq NOHA
To investigate the impact of hormonal modulation on neurodevelopmental processes, we performed single-cell RNA sequencing (ScRNA-seq) on neural organoids derived from two genetically validated human induced pluripotent stem cell (hiPSC) control lines (CTL08, male; CTL04, female). Organoids were chro...
ORGANISM(S): Homo sapiens 
2026-07-22 | E-MTAB-17184 | biostudies-arrayexpress
GenomicsHigh density copy number analysis and whole exome sequencing of chronic lymphocytic leukemia

The pathogenesis of chronic lymphocytic leukemia (CLL), the most common leukemia in adults, is still largely unknown since the full spectrum of genetic lesions that are present in the CLL genome, and therefore the number and identity of dysregulated cellular pathways, have not been iden...

phs000364.v1.p1 | EGA
TranscriptomicsInterference with ethylene perception at receptor level sheds light on auxin and transcriptional circuits associated with climacteric ripening of apple fruit (Malus x domestica Borkh.)
Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. ...
ORGANISM(S): Malus domestica 
2016-08-23 | E-GEOD-78745 | biostudies-arrayexpress
TranscriptomicsBone marrows infiltrating human neuroblastoma cells express high levels of calprotectin and HLA-G proteins.
In neuroblastoma (NB) patients metastasis are the main cause of death, thus understanding the biological and genetic features of the metastatic NB cells is needed to reach efficient target-based therapies for high risk patients. In recent years, several prognostic signatures derived from gene expres...
ORGANISM(S): Homo sapiens 
2012-01-20 | E-GEOD-25623 | biostudies-arrayexpress
TranscriptomicsExpression profiles of human primary osteoblasts (HOB) and MET transformed osteoblast clones
We studied MET-transformed human primary osteoblasts (MET-HOBs), which we previously turned into osteosarcoma cells by LV driven over-expression of MET oncogene. We obtained distinct MET transformed HOB clones derived from independent events of transgene integration. To characterise the phenotype o...
ORGANISM(S): Homo sapiens 
2013-02-28 | E-GEOD-28256 | biostudies-arrayexpress
TranscriptomicsExpression profiles osteosarcoma cell lines and MET transformed osteoblast clones
We studied MET-transformed human primary osteoblasts (MET-HOBs), which we previously turned into osteosarcoma cells by LV driven over-expression of MET oncogene. We obtained distinct MET transformed HOB clones derived from independent events of transgene integration. To characterise the phenotype o...
ORGANISM(S): Homo sapiens 
2013-02-28 | E-GEOD-28252 | biostudies-arrayexpress
TranscriptomicsIntegrative approach combining transcriptomic assay with physical and metabolite analysis reveal novel clues about the regulatory mechanism governing the climacteric ripening physiology in apple (Malus x domestica Borkh.) [WGAA]
Apple (Malus x domestica Borkh.) is a model fruit species to study the metabolic changes occurring at the onset of ripening as well the physiological mechanism governed by the hormone ethylene. In this survey, to dissect the climacteric interplay in apple, a multidisciplinary approach was employed. ...
ORGANISM(S): Malus domestica 
2016-08-23 | E-GEOD-78744 | biostudies-arrayexpress
UnknownImpact of neuromuscular block monitoring and reversal on postoperative pulmonary complications in thoracic surgery: a Bayesian analysis of the iPROVE-OLV trial.
Not available
S-EPMC12597387 | biostudies-literature
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