Robinson K K - OmicsDI

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Unknown (4327)
Transcriptomics (120)
Proteomics (113)
Genomics (49)
Metabolomics (9)
Models (6)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (132)
Mus musculus (53)
Apis mellifera (7)
Glycine max (7)
Saccharomyces cerevisiae (6)
Vitis vinifera (5)
Arabidopsis thaliana (5)
Drosophila melanogaster (5)
Bombus terrestris (3)
Salmo trutta (2)
Zea mays (2)
Mammalia (1)
Hippoglossoides platessoides (1)
Mallotus villosus (1)
Drosophila mojavensis (1)
Thalassiosira pseudonana (1)
Mytilus edulis (1)
Salmonella enterica subsp. enterica serovar Enteritidis (1)
Macaca mulatta (1)
Sorghum bicolor (1)
Halobacterium salinarum (1)
Oryza sativa (1)
Aedes aegypti (1)
Salmo salar (1)
Ovis aries (1)
Caenorhabditis elegans (1)
Escherichia coli K-12 (1)
Canis lupus familiaris (1)
Gallus gallus (1)
Danio rerio (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (131)
pride (100)
EGA (36)
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BioModels (6)
jPOST (2)
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geo (1)
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Tissue

Cell culture (23)
B cell (9)
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Embryonic stem cell (4)
Heart (4)
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Whole body (2)
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Culture supernatant (1)
Eye (1)
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HeLa cell (1)
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Kidney (1)

Disease

Acute leukemia (11)
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Disease free (3)
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Melanoma (2)
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COVID-19 (1)
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Human papillomavirus infectious disease (1)
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Lung carcinoma (1)
Male infertility (1)
Malignant pleural mesothelioma (1)
Neurofibromatosis 1 (1)
Osteosarcoma (1)
Plasmodium falciparum malaria (1)

Technology Type

Mass Spectrometry (100)
Shotgun proteomics (55)
Affinity purification coupled with mass spectrometry proteomics (22)
Bottom-up proteomics (11)
Mass spectrometry (9)
SWATH MS (8)
Data-independent acquisition (6)
Data-dependent acquisition (5)
Gel-based experiment (5)
Top-down proteomics (4)
All-ion fragmentation (2)
HDMSE (2)
MSE (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
SRM/MRM (1)

Instrument Platform

Illumina NovaSeq 6000 (7)
Illumina HiSeq 2000 (7)
Q Exactive (6)
Illumina HiSeq 2500 (5)
Illumina HiSeq 4000 (4)
NextSeq 500 (3)
Liquid Chromatography MS - alternating - hilic (3)
Liquid Chromatography MS - positive - reverse phase (3)
TruSeq RNA Sample Preparation protocol (2)
Illumina Genome Analyzer (2)
Illumina Genome Analyzer II (2)
Axon GenePix 4000B scanning hardware (2)
Illumina HiSeq 3000 (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina Hybridisation Oven (1)
Illumina iScan (1)
GenePix Professional 4200A [Axon Instruments] (1)
- (1)
NextSeq 2000 (1)
Illumina MiSeq (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Q-Exactive (1)
TripleTOF 5600 (1)
TripleTOF 5600+ (1)
5975C Series GC/MSD (Agilent) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - (1)

Publication Date

2015 (28)
2021 (24)
2025 (21)
2014 (19)
2020 (18)
2024 (17)
2012 (16)
2023 (12)
2026 (11)
2016 (11)
2018 (11)
2022 (10)
2013 (10)
2010 (10)
2011 (9)
2019 (9)
2017 (6)
2009 (4)
2008 (4)
2005 (3)
2007 (3)
2004 (2)
2006 (1)

CHEBI ID

CHEBI:17596 (6)
CHEBI:15428 (5)
CHEBI:16335 (5)
CHEBI:16708 (5)
CHEBI:18012 (5)
CHEBI:30915 (5)
CHEBI:78320 (5)
CHEBI:15611 (4)
CHEBI:15741 (4)
CHEBI:15891 (4)
CHEBI:16235 (4)
CHEBI:16704 (4)
CHEBI:16750 (4)
CHEBI:16811 (4)
CHEBI:17084 (4)
CHEBI:17126 (4)
CHEBI:17154 (4)
CHEBI:17368 (4)
CHEBI:17562 (4)
CHEBI:17568 (4)
CHEBI:17754 (4)
CHEBI:17775 (4)
CHEBI:17821 (4)
CHEBI:17822 (4)
CHEBI:18186 (4)
CHEBI:18211 (4)
CHEBI:18237 (4)
CHEBI:18257 (4)
CHEBI:22653 (4)
CHEBI:22660 (4)

Metabolite Name

3-hydroxybutyric acid (3)
Carnitine (3)
Guanine (3)
Guanosine (3)
Hypoxanthine (3)
Nicotinamide (3)
Uridine (3)
5-oxoproline (2)
AMP (2)
Alanine (2)
Arginine (2)
Arginine (2)
Asparagine (2)
Betaine (2)
Biliverdin (2)
Choline (2)
Cytidine (2)
FAD (2)
Glucose (2)
Glutamine (2)
Glycerol (2)
Glycine (2)
Histamine (2)
Histidine (2)
Indole (2)
Inosine (2)
Inosine (2)
Myristoylcarnitine (2)
N-acetylcitrulline (2)
Tyrosine (2)

IsPrivate

False (6)

First Public Date

2024 (1)

Modelling Approach

Ordinary differential equation model (5)

Study type

RNA-seq of coding RNA (51)
Transcription profiling by array (46)
ChIP-seq (10)
Methylation profiling by array (6)
RNA-seq of coding RNA from single cells (3)
High-throughput sequencing (2)
Animal - High-throughput sequencing (2)
RNA-seq of total RNA (2)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Human - High-throughput sequencing (1)
ChIP-chip by array (1)
Genotyping by array (1)
Other (1)
DNA-seq (1)
CUT&RUN (1)

Release Date

2022 (491)
2021 (460)
2024 (425)
2025 (424)
2023 (419)
2020 (331)
2018 (291)
2019 (252)
2015 (215)
2017 (195)
2016 (184)
2014 (168)
2012 (109)
2013 (106)
2011 (90)
2026 (69)
2010 (66)
2009 (58)
2008 (33)
2006 (21)
2007 (18)
2005 (13)
2003 (8)
2004 (7)
2002 (1)
2001 (1)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (4)
Center of Molecular and Cellular Oncology, Yale University (4)
Yale University (3)
Cardiac Bioengineering group, QIMR Berghofer Medical Research Institute, Brisbane, QLD, Australia (2)
Cancer Research UK Cambridge Institute University of Cambridge Li Ka Shing Centre Robinson Way Cambridge CB2 0RE UK (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Cancer Research UK Scotland Institute (Formerly the Cancer Research UK Beatson Institute) Garscube Estate Switchback Road Bearsden Glasgow, G61 1BD (1)
Cancer Research UK University of Cambridge Li Ka Shing Centre Robinson Way Cambridge, CB2 0RE (1)
Cancer Research UK, University of Cambridge, Li Ka Shing Centre, Robinson Way, Cambridge, CB2 0RE (1)
Cancer Research UK- Cambridge Institute Li Ka Shing Centre Robinson way Cambridge CB2 0RE UK (1)
Cancer Research Unit, Children’s Medical Research Institute, Faculty of Medicine and Health, The University of Sydney, Westmead NSW Australia (1)
Cardiac Bioengineering Lab, QIMR Berghofer Medical Research Institute, Brisbane, QLD, AUS (1)
Cardiac Bioengineering lab, QIMR Berghofer Medical Research Institute, Herston, QLD, AUD (1)
Cedars-Sinai Medical Center (1)
Center of Excellence in Systems Biology, Research Affairs, Faculty of Medicine, Chulalongkorn University, Bangkok 10330, Thailand (1)
Chemistry Department, University of Zurich, Zurich, Switzerland (1)
Children's Medical Research Institute, Faculty of Medicine and Health, Westmead, NSW, Australia (1)
Department of Biochemistry and Microbiology, L-Probe Lab Ghent University (1)
Department of Biochemistry and Molecular Biology and Infection and Immunity Program, Biomedicine Discovery Institute, Monash University, Melbourne, Victoria, Australia (1)
Department of Biochemistry and Molecular Biology, University of Southern Denmark, Denmark (1)
Department of Biochemistry, University of Cambridge, UK (1)
Department of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, 84602 (1)
Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QU, UK Kavli Institute for NanoScience Discovery, Dorothy Crowfoot Hodgkin Building, Oxford OX1 3QU, UK (1)
Department of Electrical Engineering and Electronics University of Liverpool Liverpool (1)
Department of Experimental Oncology, IEO, European Institute of Oncology IRCCS, Milan, Italy (1)
Department of Food Science and Technology University of California, Davis (1)
Department of Laboratory Medicine, UCSF (1)
Department of Medicine (1)
Department of Ophthalmology, Casey Eye Institute, Oregon Health & Science University, Portland, OR, USA (1)

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Mass spectrometry of neuroblastoma organoids

Collect proteomic data for organoids from relapsed neuroblastoma patients

ORGANISM(S): Homo sapiens (Human)

2025-05-06 | PXD051208 | Pride

Transcriptomic response analysis of Escherichia coli to palladium stress

The stress effect of 100 uM sodium tetrachloropalladate (II) was evaluated in Escherichia coli K-12 BW25113 strain on the transcriptome level

ORGANISM(S): Escherichia coli K-12

2021-08-12 | E-MTAB-10803 | biostudies-arrayexpress

Phylogenetic Analysis of HIV-1 Genomes Based on the Position-Weighted K-mers Method.

Not available

S-EPMC7516702 | biostudies-literature

Microwave-assisted Piloty-Robinson synthesis of 3,4-disubstituted pyrroles.

Not available

S-EPMC1939979 | biostudies-literature

Upregulation of Human Endogenous Retrovirus-K Is Linked to Immunity and Inflammation in Pulmonary Arterial Hypertension.

Not available

S-EPMC5685911 | biostudies-literature

Phase equilibrium for surfactant Ls-54 in liquid CO(2) with water and solubility estimation using the Peng-Robinson equation of state.

Not available

S-EPMC2963999 | biostudies-literature

Vitamins D and K as Factors Associated with Osteopathy in Chronic Pancreatitis: A Prospective Multicentre Study (P-BONE Study).

Not available

S-EPMC6189068 | biostudies-literature

The Essential Genome of Escherichia coli K-12.

Not available

S-EPMC5821084 | biostudies-literature

Granzyme K activates the entire complement cascade.

Not available

S-EPMC12180478 | biostudies-literature

Multiple tissue transcriptomic responses to Piscirickettsia salmonis in Atlantic salmon (Salmo salar)

This experiment was aimed at understanding the early transcriptional response to the salmon pathogen Piscirikettsia salmonis at 48h post infection in multiple tissues. Agilent-based microarray platform with 4 44 K probes per slide (Salar_2; Agilent Design ID:025520) oligo microarray was used in thi...

ORGANISM(S): Salmo salar

2012-05-01 | E-MTAB-685 | biostudies-arrayexpress

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4625 Results

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