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MetabolomicsTargeted metabolomics of F. rodentium

Targeted metabolomics of F. rodentium culture supernatants. The study was divided into four groups: 0 mg/mL, 0.04 mg/mL, 5 mg/mL, 10 mg/mL. After co-culture seven days, the culture supernatants were centrifuged 12000rpm for 5 minutes.

2026-08-13 | MTBLS14503 | MetaboLights
MetabolomicsTargeted bile acid profiling of Faecalibaculum rodentium-induced bile acid remodeling in antibiotic-treated mice
This study investigated whether Faecalibaculum rodentium remodels the intestinal bile acid pool through bacterial bile salt hydrolase activity in antibiotic-treated male C57BL/6J mice. Mice were assigned to three groups: control, Faecalibaculum rodentium gavage, and Faecalibaculum rodentium gavage c...
2026-08-07 | MTBLS15285 | MetaboLights
MetabolomicsFaecalibaculum rodentium as a key player in combating maternal obesity-induced labor disorders

The global rise in maternal obesity increases the risk of adverse maternal and neonatal outcomes. This study demonstrates that both long- (12 weeks) and short-term (gestational) exposure to a high-fat diet (HFD) induces uterine labor disorders, elevates stillbirth rates, and alters gut microbiota...

2025-08-22 | MTBLS12877 | MetaboLights
MetabolomicsTargeted metabolomics of mouse feces with F. rodentium supplementation
Targeted metabolomics of mouse feces with F. rodentium supplementation
2027-08-13 | MTBLS15335 | MetaboLights
MetabolomicsVitamin D deficiency disrupts a host–microbiota bile acid axis in aged mice to drive Faecalibaculum rodentium expansion and intestinal epithelial barrier dysfunction
This study investigated how vitamin D deficiency alters the fecal metabolome and bile acid metabolism in mice and evaluated the contribution of Faecalibaculum rodentium bile salt hydrolase activity to intestinal epithelial barrier dysfunction. Two complementary mouse experiments were included. In th...
2026-08-07 | MTBLS15279 | MetaboLights
TranscriptomicsAnalysis of the evolutionary adaptation of an AraC-like global regulatory protein in the murine enteric pathogen Citrobacter rodentium
An experiment to test the equivalence of the Citrobacter rodentium RegA and E.Coli SMS 3-5 homologue 8 Conditions (4 Genotypes by 2 treatments) in duplicate. Reference design without dye swaps.
ORGANISM(S): Citrobacter rodentium 
2015-02-19 | E-GEOD-57689 | biostudies-arrayexpress
TranscriptomicsRNA-Seq of C. rodentium
Whole genome trancription study of Citrobacter rodentium grown in rich media.
ORGANISM(S): Citrobacter rodentium 
2011-02-12 | E-MTAB-502 | biostudies-arrayexpress
ProteomicsCitrobacter rodentium ICC168 CPX SILAC
SILAC experiment to investigate proteome changes in response to the disruption of CPX in Citrobacter rodentium ICC168.
ORGANISM(S): Citrobacter rodentium ICC168 
2019-01-07 | PXD009049 | Pride
Lc-ms Bacterial Silac 
ProteomicsC. rodentium remodels metabolism in IEC
The mechanisms by which the mouse pathogen Citrobacter rodentium triggers effacement of the brush border microvilli, colitis, hyperplasia and dysbiosis remain poorly understood. We investigated the impact of C. rodentium infection on the proteomic and metabolic landscapes of intestinal epithelial ce...
ORGANISM(S): Citrobacter rodentium Mus musculus (Mouse) 
2018-01-10 | PXD005004 | Pride
Colon Lc-msms Citrobacter rodentium Mouse Tmt Phosphorylation 
GenomicsCitrobacter rodentium
Citrobacter rodentium Genome sequencing and assembly
PRJNA1099276 | ENA
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