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Unknown (1862)
Proteomics (123)
Transcriptomics (108)
Genomics (39)
Metabolomics (15)
Genomic (1)
Multiomics (1)

Organisms

Homo sapiens (148)
Mus musculus (62)
Dictyostelium discoideum (8)
Rattus norvegicus (6)
Caenorhabditis elegans (3)
Drosophila melanogaster (3)
Arabidopsis thaliana (3)
Escherichia coli (3)
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Synechocystis sp. PCC 6803 (2)
Danio rerio (2)
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Pan troglodytes (1)
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Candida albicans (1)
Sus scrofa (1)
Bos taurus (1)
Candidatus Thiodictyon syntrophicum str. Cad16 (1)
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Rattus rattus (1)
Saccharomyces cerevisiae (1)
Sus scrofa domesticus (1)
recombinant SARS coronavirus (1)

Organisms

Saccharomyces cerevisiae (1)
gut metagenome (1)

Repository

biostudies-arrayexpress (115)
pride (109)
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Tissue

Cell culture (21)
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Disease

Colon cancer (7)
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COVID-19 (3)
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Normal (1)
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Cancer (1)
Cardiovascular system disease (1)
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Female breast cancer (1)
Glioblastoma (1)
Hermansky-Pudlak syndrome (1)
Idiopathic interstitial pneumonia (1)
Idiopathic pulmonary fibrosis (1)
Inflammatory bowel disease (1)
Liver cancer (1)
Lung adenocarcinoma (1)

Technology Type

Mass Spectrometry (109)
Shotgun proteomics (82)
Bottom-up proteomics (14)
Mass spectrometry (13)
Data-dependent acquisition (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-independent acquisition (7)
Illumina HiSeq 2000 (2)
Mass spectrometry assay (2)
Illumina HiSeq 2000, Affymetrics_SNP_6.0- (1)
Illumina HiSeq 2000, Affymetrics_SNP_6.0-, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
Affinity proteomics (1)
All-ion fragmentation (1)
DiaPASEF (1)
Mass spectrometry imaging (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (11)
Illumina HiSeq 2500 (5)
Gas Chromatography MS - (4)
Q Exactive (3)
TimsTOF Pro (3)
Illumina HiSeq 2000 (2)
NextSeq 500 (2)
5975C Series GC/MSD (Agilent) (2)
Liquid Chromatography MS - positive - hilic (2)
Liquid Chromatography MS - positive - reverse phase (2)
SYNAPT HDMS (Waters) (2)
Illumina Stranded TruSeq RNA (1)
Agilent 2100 Bioanalyzer, Applied Biosystems 7900HT Sequence Detection System, Illumina TruSeq Small RNA Sample Preparation Kit (1)
RNeasy mini Kit, Ribo-Zero Human/Mouse/Rat kit (1)
Agilent 2100 Bioanalyzer (1)
Illumina Genome Analyzer IIx (1)
418 [Affymetrix] (1)
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Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
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Q Exactive HF (1)
TimsTOF (1)
6460 Triple Quadrupole LC/MS (Agilent) (1)
Gas Chromatography MS - positive (1)
LECO Pegasus 4D (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)

Publication Date

2021 (24)
2022 (23)
2014 (23)
2019 (20)
2013 (17)
2026 (16)
2023 (15)
2024 (14)
2025 (13)
2015 (13)
2016 (12)
2020 (11)
2018 (11)
2010 (9)
2017 (8)
2012 (5)
2008 (5)
2009 (4)
2006 (4)
2011 (3)
2004 (1)

UNIPROT ID/AC

A0A024R8H9 (1)
A0A024RC46 (1)
A0A087WTX5 (1)
A0A087WXI0 (1)
A0A087WYL9 (1)
A0A087X130 (1)
A0A087X1V9 (1)
A0A0A0MS51 (1)
A0A0A0MSA7 (1)
A0A0B4J220 (1)
A0AV02 (1)
A0AVT1 (1)
A0FGR8 (1)
A0FGR8-2 (1)
A0FGR8-6 (1)
A2AJT9 (1)
A2BFH1 (1)
A2NUT2 (1)
A3KMH1 (1)
A4D110 (1)
A4D1S5 (1)
A4UGR9 (1)
A5A3E0 (1)
A5YKK6 (1)
A6NDU8 (1)
A6NHL2 (1)
A6NHQ2 (1)
A6NHR9 (1)
A6NJ78 (1)
A6NJJ0 (1)

ENSEMBL ID

ENSG00000170477 (1)

CHEBI ID

CHEBI:15428 (12)
CHEBI:30769 (10)
CHEBI:15741 (9)
CHEBI:18012 (9)
CHEBI:15756 (8)
CHEBI:16000 (8)
CHEBI:16335 (8)
CHEBI:16737 (8)
CHEBI:16750 (8)
CHEBI:16865 (8)
CHEBI:17148 (8)
CHEBI:17822 (8)
CHEBI:18186 (8)
CHEBI:28842 (8)
CHEBI:6650 (8)
CHEBI:15891 (7)
CHEBI:16199 (7)
CHEBI:16449 (7)
CHEBI:17268 (7)
CHEBI:17553 (7)
CHEBI:17992 (7)
CHEBI:18237 (7)
CHEBI:18257 (7)
CHEBI:22660 (7)
CHEBI:24898 (7)
CHEBI:25017 (7)
CHEBI:25094 (7)
CHEBI:26271 (7)
CHEBI:26986 (7)
CHEBI:27266 (7)

Metabolite Name

Adenosine (8)
Glycine (8)
Taurine (8)
Creatinine (7)
Inosine (7)
Xanthine (7)
Creatine (6)
Ethanolamine (6)
Guanosine (6)
L-Alanine (6)
L-Glutamine (6)
L-Methionine (6)
L-Tryptophan (6)
Palmitic acid (6)
Succinic acid (6)
Adenine (5)
Glutathione (5)
L-Asparagine (5)
L-Leucine (5)
L-Lysine (5)
L-Phenylalanine (5)
L-Tyrosine (5)
Ornithine (5)
Putrescine (5)
Pyridoxine (5)
Serine (5)
Stearic acid (5)
UMP (5)
Urea (5)
AMP (4)

First Public Date

2025 (3)
2023 (2)

Study type

Transcription profiling by array (64)
RNA-seq of coding RNA (25)
Comparative genomic hybridization by array (6)
ChIP-seq (6)
Transcription profiling by RT-PCR (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
RNA-seq of non coding RNA (2)
Cell line - One-color microarray (1)
High-throughput sequencing (1)
Genotyping by array (1)
MicroRNA profiling by high throughput sequencing (1)
Methylation profiling by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (238)
2021 (223)
2024 (209)
2025 (200)
2023 (191)
2020 (154)
2018 (121)
2019 (105)
2014 (83)
2017 (81)
2016 (71)
2015 (70)
2013 (51)
2010 (34)
2012 (33)
2026 (31)
2009 (26)
2011 (24)
2008 (16)
2006 (5)
2007 (3)
2005 (3)
2004 (2)
2002 (2)
2000 (1)

Lab affiliation

Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden (4)
Discovery Proteomics Facility University of Oxford (4)
Department II of Internal Medicine and Center for Molecular Medicine Cologne, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany CECAD, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany (3)
Discovery Proteomics Facility, University of Oxford (3)
Max-Planck Institute of Biochemistry, Department of Cellular Biochemistry (3)
Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford OX3 7FZ, UK (3)
Target Discovery Institute, University of Oxford (3)
Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet SE 17177 Stockholm, Sweden. Department of Pharmacological & Technological Chemistry, I.M. Sechenov First Moscow State Medical University, Moscow, 119146, Russia. (2)
Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden (2)
Discovery Proteomics Facility Target Discovery Institute University of Oxford (2)
Discovery Proteomics Facility University of Oxford Target Discovery Institute, NDMRB Oxford, OX3 7FZ (2)
Discovery Proteomics Facility, Oxford (2)
Discovery Proteomics Laboratory, University of Oxford, UK (2)
Division of Physiological Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17 177 Stockholm, Sweden (2)
MBB, Karolinska Institutet (2)
Target discovery Institute (2)
University of Oxford, Discovery Proteomics Facility, Target Discovery Institute (2)
1) Department II of Internal Medicine and Center for Molecular Medicine Cologne, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany 2) CECAD, University of Cologne, Faculty of Medicine and University Hospital Cologne, Cologne, Germany (1)
1Target Discovery Institute, Nuffield Department of Medicine, University of Oxford, Roosevelt Drive, Oxford, OX3 7FZ, UK (1)
Andalusian Center for Moelcular Biology and Regenerative Medicine (CABIMER), University of Sevilla, Spain (1)
Associate Professor and Head of Discovery Proteomics Facility (1)
Bioanalytics department, Proteomics group, Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V., Dortmund, Germany (1)
CABIMER - University of Sevilla (1)
CABIMER University of Sevilla (1)
CABIMER-University of Sevilla (1)
CECAD-Cluster of Excellence, University of Cologne, Joseph-Stelzmann-Str. 26, D-50931, Cologne, Germany; Department II of Internal Medicine, Faculty of Medicine and University Hospital Cologne, University of Cologne, Kerpener Str. 62, D-50937, Cologne, Germany; Center for Molecular Medicine Cologne (CMMC), University of Cologne, Robert-Koch-Str. 21, D-50931, Cologne, Germany (1)
Center for Inflammation Research, VIB, Ghent, Belgium (1)
Centre Algatech, Institute of Microbiology, Academy of Sciences of the Czech Republic, Třeboň,CZ. (1)
Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm 17177, Sweden (1)
Chemistry I, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm 17177, Sweden. Department of Pharmacological & Technological Chemistry, I.M. Sechenov First Moscow State Medical University, Moscow 119146, Russia. (1)

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xref:PubMed:27708008 (1)

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Tetrahydrobiopterin modulates ubiquitin conjugation to UBC13/UBE2N and proteasome activity by S-nitrosation

Nitric Oxide (NO) is an intracellular signalling mediator, which affects many biological processes via the posttranslational modification of proteins through S-nitrosation. The availability of NO and NOS-derived reactive oxygen species (ROS) from enzymatic uncoupling are determined by the NO synthas...

ORGANISM(S): Mus musculus (Mouse)

2018-10-02 | PXD010430 | Pride

Biotin switch S-nitrosylation

The timing of bacterial mesophyll infection shapes the leaf chemical landscape during the interaction

Chemistry in eukaryotic intercellular spaces is shaped by both hosts and symbiotic microorganisms such as bacteria. Pathogenic microorganisms like barley associated Xanthomonas translucens (Xt) swiftly overtake the inner leaf tissue becoming the dominant microbial community member during disease ...

2024-02-01 | MTBLS7676 | MetaboLights

‘A lost chapter of ancient art’: archaeometric examinations of panel paintings from Roman Egypt

Multi-analytical study of the materials and techniques used in the production of three Roman panel paintings produced in Egypt around 2000 years ago and stored at the Ny Carlsberg Glyptotek in Copenhagen (Denmark).

ORGANISM(S): Bos taurus (Bovine)

2023-11-27 | PXD037269 | Pride

Wood analysis Raman spectroscopy Proteomics Ftir Roman panel paintings Ancient polychromy Xrd Radiocarbon dating Sem-eds Pigment identification Multi-spectral imaging

Dendrochronological evidence for long-distance timber trading in the Roman Empire.

Not available

S-EPMC6892532 | biostudies-literature

Low Genetic Impact of the Roman Occupation of Britain in Rural Communities.

Not available

S-EPMC11393495 | biostudies-literature

From Ancient Techniques to Modern Solutions: In Situ Synthesis of C-S-H for Sandstone Conservation.

Not available

S-EPMC12362824 | biostudies-literature