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MetabolomicsPb Stress and Ectomycorrhizas: Strong Protective Proteomic Responses in Poplar Roots Inoculated with Paxillus involutus Isolate and Characterized by Low Root Colonization Intensity
The commonly observed increased heavy metal tolerance of ectomycorrhized plants is usually linked with the protective role of the fungal hyphae covering colonized plant root tips. However, the molecular tolerance mechanisms in heavy metal stressed low-colonized ectormyocrrhizal plants characterized ...
2022-01-11 | MTBLS1847 | MetaboLights
TranscriptomicsMapping Gene Activity of Arabidopsis Root Hairs
We provide an atlas of gene and protein expression in Arabidopsis root hair cells, generated by paired-end RNA-seq and LC/MS-MS analysis from protoplasts that carry the root hair-specific pEXP7-GFP reporter construct. In total, transcripts from 23,234 genes were detected in root hairs; those related...
ORGANISM(S): Arabidopsis thaliana 
2012-12-04 | E-MTAB-4375 | biostudies-arrayexpress
ProteomicsLarge-scale proteome characterization of the cassava root
Cassava is the most important root crop in the tropics but rapid post-harvest physiological root deterioration (PPD) is a major constraint to commercial cassava production. We used label-free quantitative proteomics to generate an extensive cassava root and PPD proteome. Over 2400 unique proteins we...
ORGANISM(S): Manihot esculenta (Cassava) (Jatropha manihot) 
2014-06-03 | PXD000587 | Pride
Cassava Proteomics Root Post-harvest deterioration 
ProteomicsEffects of exogenous auxin on the Arabidopsis thaliana root proteome
This study evaluates the effects of exogenous auxin on the Arabidopsis thaliana root proteome at 8, 12, and 24 hours post-treatment.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2017-07-18 | PXD001400 | Pride
Arabidopsis Auxin Root 
OtherPhosphoproteomics Reveals the Effect of Ethylene in Soybean Root under Flooding Stress.
Data from ProteomeXchange, PXD ID: PXD000898. File: 51 0 4.mgf. Published as part of J Proteome Res. 2014 Oct 24 . From the Abstract: {{i}} To explore the flooding-responsive mechanisms in early-stage soybean, a phosphoproteomic approach was used. Two-day-old soybean plants were treated without or ...
ORGANISM(S): Glycine_max 
GPM32310004941 | GPMDB
Resource Reanalysis 
ProteomicsShotgun proteomics of soybean root nodules infected by Bradyrhizobium japonicum
Global bottom-up proteomics analysis of proteins purified from soybean root nodules infected with either WT or nifH- mutant Bradyrhizobium japonicum. Nine glycoproteins containing Lewis-a N-glycans, with 3 distinct Lewis-a epitopes (Hex:5 HexNAc:4 dHex:3 Pent:1, Hex:4 HexNAc:4 dHex:2 Pent:1, and Hex...
ORGANISM(S): Glycine Max (ncbitaxon:3847) 
2022-01-31 | MSV000088754 | MassIVE
ProteomicsStudy on the proteomic response of 5mm sections of root tips to water-deficit stress in two contrasting genotypes of rice
In this study, we analysed the proteomic response of 5mm sections of root tips to water-deficit stress in two contrasting genotypes of rice: IR64, a lowland, drought-susceptible, and shallow-rooting genotype; and Azucena, an upland, drought-tolerant, and deep-rooting genotype. Using a Partial Least ...
ORGANISM(S): Oryza sativa (Rice) 
2022-08-11 | PXD033343 | Pride
Tmt Drought Proteome Root Rice 
Proteomicswheat root MALDI-TOF-MS/MS - Root Proteomics Reveals the Effects of Wood Vinegar on Wheat Growth and Subsequent Tolerance to Drought Stress
To investigate the proteome pattern of wheat roots following a WV seed presoaking treatment under drought stress, comparative proteomic analysis using two-dimensional polyacrylamide gel electrophoresis was employed for wheat roots. Obtained DEPs were digested with trypsin and subjected to 5800 MALDI...
ORGANISM(S): Triticum aestivum (Wheat) 
2019-11-13 | PXD012150 | Pride
Wheat Root Maldi-tof-ms/ms 
ProteomicsiTRAQ-based quantitative proteomic analysis of Platycladus orientalis roots
We performed proteomic analyses of the roots in non-root pruned (control) and root-pruned Platycladus orientalis seedlings at different sampling times.
ORGANISM(S): Platycladus orientalis 
2022-02-15 | PXD020698 | Pride
Root Platycladus orientalis Itraq lc-ms/ms 
ProteomicsRoot isoprene formation alters lateral root development Maja Miloradovic van Doorn
Isoprene is a C5 volatile organic compound, which can protect aboveground plant tissue from abiotic stress such as short-term high temperatures and accumulation of reactive oxygen species (ROS). Here, we uncover new roles for isoprene in the plant belowground tissues. By analyzing Populus x canescen...
ORGANISM(S): Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) 
2020-06-16 | PXD019789 | Pride
Populus x canescens  ros  voc  isoprene  isoprene promoter  lateral roots  poplar  reactive oxygen species  roots  volatile organic compounds. 
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