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TranscriptomicsP19 embryonic carcinoma (EC) cells induced to form cardiomyocytes in vitro
SAGE identification of differentiation responsive genes in P19 embryonic cells induced to form cardiomyocytes in vitro. P19 embryonic carcinoma (EC) cells, induced to form cardiomyocytes in vitro - undifferentiated cells, day 3+0.5 and day 3+3.0 of differentiation protocol. Keywords = EC cells, P19,...
ORGANISM(S): Mus musculus 
2002-07-18 | E-GEOD-42 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of head and neck squamous cell carcinoma
Sage performed on microdissection of Head and Neck tumor, and Head and Neck normal tissue comparative analysis of gene expression profiles of head and neck squamous cell carcinoma and Head and Neck normal tissue
ORGANISM(S): Homo sapiens 
2008-09-30 | E-GEOD-11986 | biostudies-arrayexpress
TranscriptomicsTranscriptome of a mouse kidney cortical collecting duct cell line: effects of aldosterone and vasopressin
In this study, we analyzed the transcriptome of a highly differentiated mouse clonal CCD principal cell line (mpkCCD(cl4)) and the changes in the transcriptome induced by aldosterone and vasopressin. Serial analysis of gene expression (SAGE) was performed on untreated cells and on cells treated with...
ORGANISM(S): Mus musculus 
2003-09-24 | E-GEOD-678 | biostudies-arrayexpress
TranscriptomicsFunctional categorization of transcriptome in the species Symphysodon aequifasciatus Pellegrin 1904 (Perciformes: Cichlidae) exposed to benzo[a]pyrene and phenanthrene
This study aims to evaluate the transcriptome alterations, through cDNA libraries, associated with the effects of the combination of two PAHs, benzo[a]pyrene (0.5M-NM-
ORGANISM(S): Symphysodon aequifasciata 
2013-12-09 | E-GEOD-51149 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of CD8+ T Lymphocytes isolated from HTLV-1 infected individuals
HTLV-1 is the etiologic agent of HTLV-1 associated myelopathy/tropical spastic paraparesis (HAM/TSP). CD8+ T cells may contribute to the protection or development of HAM/TSP. In this study we used SAGE to assess gene expression profiles of CD8+ T cells isolated from HTLV-1 asymptomatic carriers (HAC...
ORGANISM(S): Homo sapiens 
2013-05-08 | E-GEOD-26150 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of the early-stage CD34+ differentiation process
To better understand the early events regulating lineage-specific hematopoietic differentiation, we analyzed the transcriptional profiles of CD34+ human hematopoietic stem and progenitor cells (HSPCs) subjected to differentiation stimulus. CD34+ cells were cultured for 12 and 40 hours in liquid cult...
ORGANISM(S): Homo sapiens 
2010-12-01 | E-GEOD-22092 | biostudies-arrayexpress
UnknownIncidence and associated factors of acute postoperative pain within the first 24 h in women undergoing cesarean delivery at a resource-limited setting in Addis Ababa, Ethiopia: A prospective observational study.
Not available
S-EPMC9608192 | biostudies-literature
TranscriptomicsEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - II
Background Next Generation Sequencing technologies have facilitated differential gene expression analysis through RNA-seq and Tag-seq methods. RNA-seq has biases associated with transcript lengths, lacks uniform coverage of regions in mRNA and requires 10–20 times more reads than a typical Tag-seq. ...
ORGANISM(S): Arabidopsis thaliana 
2014-06-20 | E-GEOD-51720 | biostudies-arrayexpress
GenomicsPacbio Hifi sequencing of a male cape dune mole-rat kidney sample
One PacBio Hifi sequencing run from the kidney of a single male CDMR (Bathyergus suillus) sample used to make the mBatSui1.1.primary genome assembly as an evolutionary comparator to our telomere-to-telomere naked mole-rat genome assembly. Specifically, we assembled a CDMR from a wild-derived sample ...
ORGANISM(S): Bathyergus suillus 
2026-08-05 | E-MTAB-17312 | biostudies-arrayexpress
TranscriptomicsEXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics - III
Background Next Generation Sequencing technologies have facilitated differential gene expression analysis through RNA-seq and Tag-seq methods. RNA-seq has biases associated with transcript lengths, lacks uniform coverage of regions in mRNA and requires 10M-bM-^@M-^S20 times more reads than a typical...
ORGANISM(S): Arabidopsis thaliana 
2014-06-20 | E-GEOD-52596 | biostudies-arrayexpress
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