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TranscriptomicsGenome wide analysis of macrophage gene expression after L. monocytogenes infection
Analysis of macrophage transcriptome after L. monocytogenes infection Total RNA isolated from Listeria monocytogenes infected macrophages 24 hours post-infection was compared to control non infected macrophages
ORGANISM(S): Homo sapiens 
2012-05-28 | E-GEOD-34103 | biostudies-arrayexpress
GenomicsEpigenomic landscapes of human inflammation associated macrophages
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Homo sapiens 
2016-02-28 | E-GEOD-66595 | biostudies-arrayexpress
TranscriptomicsGene expression profiles of control GC424 tumor cell lines and after downregulation of the SV40 large T-antigen
Analysis of global gene expression in a tumor cell line established from a CEA424-Tag mouse and comparison with the expressed gene profile after downregulating the expression of the large T antigen Total RNA obtained from cultured control cell lines and after siRNA mediated downregulation of the SV...
ORGANISM(S): Mus musculus 
2012-08-01 | E-GEOD-27710 | biostudies-arrayexpress
TranscriptomicsTranscriptome signature of mouse embryonic stem cell-derived microglia is closely related to primary cultured microglia
Preparation of primary microglial cultures from postnatal mice is tedious with a low yield, high variability and risk of astrocytic contamination. Microglia derived from embryonic stem cells (ESdM) have been suggested as alternative source, but it is unclear how closely ESdM resemble the molecular p...
ORGANISM(S): Mus musculus 
2013-07-11 | E-GEOD-43808 | biostudies-arrayexpress
TranscriptomicsCX3CR1/Fractalkine receptor expression separates memory CD8+ T cells with distinct functional profiles
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Mus musculus 
2016-06-10 | E-GEOD-63147 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of gene expression in VAV1-/- versus VAV1+/+ bone marrow (BM)-macrophages
Analysis of differential gene expression profiles in VAV1-/- versus VAV+/+ BM-macrophages , respectively. A distinct expression profile in VAV1-/- versus VAV1+/+ (wild-type) BM-macrophages allows to resolve molecular mechanisms. Total RNA was obtained froms BM-macrophages of VAV1+/+ and VAV1-/- mic...
ORGANISM(S): Mus musculus 
2013-03-08 | E-GEOD-36123 | biostudies-arrayexpress
TranscriptomicsGenome-wide analysis of the effect of long-term freezing of PAXgene Blood RNA tubes
Analysis of long-term freezing on the stability of transcriptome profiles in PAXgene stabilized whole blood samples. In the present study it was tested if long-term freezing of PAXgene RNA tubes (up to one year) has an influence on the transcriptome profile of peripheral whole blood samples. Resul...
ORGANISM(S): Homo sapiens 
2011-07-21 | E-GEOD-24757 | biostudies-arrayexpress
TranscriptomicsComparative global transcriptomic profiling of human ES and iPSs cells and their derived microdissected cardiac clusters
Recent establishment of induced pluripotent stem (iPS) cells opened new avenues for generating human patient-specific stem cell derivatives that can be used for in vitro modeling of human disease, drug development and cell replacement therapy. In this study we analyzed the molecular and functional p...
ORGANISM(S): Homo sapiens 
2010-09-15 | E-GEOD-17579 | biostudies-arrayexpress
TranscriptomicsTranscriptome wide analysis of classically and alternatively activated macrophages
Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goals of this study are to compare NGS-derived human M1- and M2-like macrophage profiling (RNA-seq) to microarray and quantitative reverse transcription polymerase chain reaction (qRT–PCR) methods an...
ORGANISM(S): Homo sapiens 
2012-10-01 | E-GEOD-36952 | biostudies-arrayexpress
TranscriptomicsTranscriptome wide analysis of untreated, classically and alternatively activated macrophages
Analysis of human M0-, M1-, and M2-like macrophages. Total RNA was isolated from untreated, classically and aternative activated human macrophages
ORGANISM(S): Homo sapiens 
2012-10-01 | E-GEOD-35449 | biostudies-arrayexpress
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