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TranscriptomicsTranscription profiling of sugarcane mosaic virus (SCMV) resistance in maize
The molecular mechanisms underlying the development and progression of sugarcane mosaic virus (SCMV) infection in maize are poorly understood. A transcript profiling study based on maize unigene-microarrays was conducted to identify genes associated with SCMV resistance in the near isogenic line (NI...
ORGANISM(S): Zea mays 
2005-01-21 | E-MEXP-253 | biostudies-arrayexpress
TranscriptomicsSurvey of RNA viruses present in East African maize with symptoms of maize lethal necrosis.
Next-generation sequencing survey of maize plants exhibiting symptoms of maize lethal necrosis, collected from Kenyan and Ethiopian farmers in August 2014. Up to three samples per site were sequenced, and sites were separated by at least 10km. Data contains maize transcriptome and a variety of RNA v...
ORGANISM(S): Zea mays 
2018-12-01 | E-MTAB-7002 | biostudies-arrayexpress
OtherDegradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
The maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV) were inoculated with SCMV (SC, SM) and phosphate buffer (MC, MM), respectively to subjected to degradome sequencing.
ORGANISM(S): Zea mays 
2024-08-01 | GSE234274 | GEO
GenomicsDegradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
Degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
PRJNA980673 | ENA
TranscriptomicsWhole-transcriptome RNA sequencing and degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
The maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV) were inoculated with SCMV (SC, SM) and phosphate buffer (MC, MM), respectively to subjected to whole-transcriptome RNA sequencing and degradome sequencing.
ORGANISM(S): Zea mays 
2024-08-01 | GSE233952 | GEO
GenomicsWhole-transcriptome RNA sequencing and degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
Whole-transcriptome RNA sequencing and degradome sequencing were performed on maize inbred lines Chang7-2 (resistant to SCMV) and Mo17 (susceptible to SCMV).
PRJNA978633 | ENA
TranscriptomicsTranscription profiling of maize infected with SCMV or MDMV to identify candidate genes for resistance
Hybrydization of virus treated mays plant of four different genotypes, from totally sensitive to resistant ones.
ORGANISM(S): Zea mays 
2008-12-12 | E-TABM-586 | biostudies-arrayexpress
UnknownShort distance movement of genomic negative strands in a host and nonhost for Sugarcane mosaic virus (SCMV).
Not available
S-EPMC3036626 | biostudies-literature
UnknownReference genes for gene expression studies targeting sugarcane infected with Sugarcane mosaic virus (SCMV).
Not available
S-EPMC6423880 | biostudies-literature
Genomics
RNA-Seq of plants infected with SCMV
PRJNA846583 | ENA
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