Seo M S MS - OmicsDI

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Unknown (151)
Proteomics (49)
Metabolomics (9)
Transcriptomics (5)

Organisms

Homo sapiens (27)
Mus musculus (10)
Arabidopsis thaliana (2)
Citrullus lanatus (1)
Saccharomyces cerevisiae (1)
Akkermansia muciniphila ATCC BAA-835 (1)
Caenorhabditis elegans (1)
Drosophila melanogaster (1)
Oryctolagus cuniculus (1)
Rattus norvegicus (1)
Streptococcus pneumoniae D39 (1)
Xenopus laevis (1)

Repository

pride (39)
MassIVE (8)
GNPS (6)
biostudies-arrayexpress (5)
MetaboLights (3)
jPOST (2)

Tissue

Cell culture (13)
Brain (4)
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Permanent cell line cell (3)
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Fibroblast (2)
HEK-293T cell (2)
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Egg (1)
Embryo (1)
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HEK-293 cell (1)
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Ovary (1)
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Retina (1)
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Soleus (1)

Disease

Breast cancer (3)
Acute leukemia (2)
Alzheimer's disease (2)
Disease free (2)
Parkinson's disease (2)
Cervix carcinoma (1)
Colon cancer (1)
Myopia (1)
Ogden syndrome (1)
Prostate adenocarcinoma (1)
Prostate cancer (1)
Toxic encephalopathy (1)

Technology Type

Mass Spectrometry (39)
Shotgun proteomics (19)
Data-dependent acquisition (10)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (5)
Gel-based experiment (3)
HDMSE (3)
Mass spectrometry (2)
Mass spectrometry assay (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Top-down proteomics (1)

Instrument Platform

Agilent GC 7890A coupled with a single quadrupole MSD 5975C (5)
LTQ Velos ETD (5)
TripleTOF 5600 (4)
LTQ Orbitrap Elite (3)
LTQ Velos (2)
ACQUITY UPLC H-Class (1)
LTQ Orbitrap Velos (1)
Q Exactive (1)
TripleTOF 6600 (1)
Agilent 7890A GC-LECO Pegasus HT TOFMS (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2023 (11)
2020 (9)
2025 (9)
2026 (6)
2022 (5)
2019 (4)
2018 (4)
2017 (4)
2021 (3)
2016 (2)
2011 (2)
2024 (2)
2014 (1)
2012 (1)

CHEBI ID

CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15940 (2)
CHEBI:16865 (2)
CHEBI:18012 (2)
CHEBI:30763 (2)
CHEBI:30769 (2)
CHEBI:32816 (2)
CHEBI:10072 (1)
CHEBI:10213 (1)
CHEBI:10352 (1)
CHEBI:113542 (1)
CHEBI:132223 (1)
CHEBI:133981 (1)
CHEBI:140999 (1)
CHEBI:15346 (1)
CHEBI:15350 (1)
CHEBI:15351 (1)
CHEBI:15354 (1)
CHEBI:15380 (1)
CHEBI:15414 (1)
CHEBI:15422 (1)
CHEBI:15467 (1)
CHEBI:15468 (1)
CHEBI:15479 (1)
CHEBI:15517 (1)
CHEBI:15525 (1)
CHEBI:15531 (1)
CHEBI:15539 (1)
CHEBI:15584 (1)

Metabolite Name

(2S)-2-isopropylmalic acid (1)
(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(R)-pantothenic acid (1)
(S)-dihydroorotic acid (1)
(S)-lactic acid (1)
(S)-malic acid (1)
1-methyladenosine (1)
1-methylnicotinamide (1)
1H-indole (1)
2'-deoxyadenosine (1)
2'-deoxyadenosine 5'-monophosphate (1)
2'-deoxycytidine (1)
2'-deoxycytosine 5'-monophosphate (1)
2'-deoxyguanosine (1)
2'-deoxyguanosine 5'-monophosphate (1)
2'-deoxyinosine (1)
2'-deoxyuridine (1)
2,3-bisphospho-D-glyceric acid (1)
2,3-dihydroxybenzoic acid (1)
2-aminoadipic acid (1)
2-furoic acid (1)
2-oxobutanoic acid (1)
2-oxoglutaric acid (1)
3',5'-cyclic AMP (1)
3'-dephospho-CoA (1)
3,5-Diiodothyronine (1)
3-hydroxy-1-benzopyran-2-one (1)
3-hydroxyanthranilic acid (1)
3-hydroxybutyric acid (1)
3-methyladipic acid (1)

Modification

Not available (1)

Study type

RNA-seq of coding RNA (2)
Comparative genomic hybridization by array (1)
Transcription profiling by array (1)
Methylation profiling by array (1)

Release Date

2022 (25)
2023 (22)
2025 (19)
2021 (17)
2024 (13)
2017 (11)
2019 (9)
2020 (8)
2018 (7)
2014 (6)
2016 (5)
2011 (3)
2013 (3)
2026 (2)
2015 (2)
2012 (1)
2010 (1)
2008 (1)
2007 (1)

Lab affiliation

Assistant professor, School of Biological Sciences, Seoul National University (4)
Assistant professor, School of Biological Sciences, Seoul National University. (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, Korea School of Biological Sciences, Seoul National University, Seoul 08826, Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, S. Korea School of Biological Sciences, Seoul National University, Seoul 08826, S. Korea (1)
Center for RNA Research, Institute for Basic Science, Seoul National University (1)
Center for Theragnosis, Korea Institute of Science and Technology, Republic of Korea (1)
Dana Farber Cancer Institute (1)
Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School; Boston, MA, United States (1)
Department of Biological Sciences, College of Information and Bioengineering, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea (1)
Department of Biological Sciences, Ulsan National Institute of Science and Technology,50 UNIST-gil, Ulju-gun, Ulsan 44919, Republic of Korea (1)
Department of Biomedical Science and Technology, Kyung Hee Medical Science Research Institute, Kyung Hee University, Seoul, South Korea (1)
Department of Brain Sciences, Daegu Gyeongbuk Institute of Science & Technology (1)
Department of Cancer Biology, Dana-Farber Cancer Institute Department of Cell Biology, Harvard Medical School (1)
Department of Chemistry & Chemical Biology, Northeastern University (1)
Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan Department of Bioengineering, School of Engineering, The University of Tokyo, Tokyo 113-8656, Japan (1)
Department of Chemistry and Chemical biology, Northeastern University (1)
Department of Chemistry, Seoul National University, Seoul 08826, Korea (1)
Department of Life Sciences, Korea University, Seoul 02841, Korea (1)
Department of Microbial Proteomics, Institute of Microbiology, University of Greifswald, Greifswald, Germany (1)
Department of Microbiology, Asan Medical Institute of Convergence Science and Technology, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea (1)
Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology and College of Medicine or College of Pharmacy, Seoul National University, Republic of Korea. (1)
Department of Molecular Medicine, CMRI, Exosome Convergence Research Center (ECRC), School of Medicine, Kyungpook National University, Daegu, Republic of Korea. (1)
Department of Neurology Institute for Cell Engineering Johns Hopkins University School of Medicine (1)
Department of Ophthalmology, Yongin Severance Hospital, Yonsei University College of Medicine, Yongin, Korea (1)
Department of Physiology and Department of Biomedical Sciences, Ajou University School of Medicine, Suwon, Republic of Korea Immune-network pioneer research center, Ajou University School of Medicine, Suwon, Republic of Korea (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), 267 Gajeong-ro, Yuseong-gu, Daejeon 34113, Republic of Korea (1)
Group for Biometrology, Korea Research Institute of Standards and Science (KRISS), Daejeon, 34113, Republic of Korea (1)
Institute for Basic Science and Seoul National University (1)
Korea Institute of Science and Technology, Seoul, Republic of Korea. (1)
Korea institute of science and technology, Doping control center, Seoul, S,Korea (1)

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An Integrated Biochemical, Proteomics, and Metabolomics Approach for Supporting Medicinal Value of Panax ginseng Fruits (GC-MS assay)

Panax ginseng roots are well known for their medicinal properties and have been used in Korean and Chinese traditional medicines for 1000s of years. However, the medicinal value of P. ginseng fruits remain poorly characterized. Using gas chromatography-time of flight mass spectrometry (GC-TOF MS), 6...

2016-11-18 | MTBLS350 | MetaboLights

Transcriptome profiling of differentially expressed genes from floral buds and flowers of male sterile and fertile lines in watermelon

Male sterility is important mechanism in watermelon for production of hybrid seed. While some fruit development related studies were widely performed in watermelon, there are no reports of profiling gene expression in floral organs of watermelon. RNA-seq analysis was performed in order to identify m...

ORGANISM(S): Citrullus lanatus

2016-01-04 | E-GEOD-69073 | biostudies-arrayexpress

Epigenetic resetting in the Parkinson's disease entail histone modification remodeling.

Parkinson's disease (PD) is a progressive neurodegenerative disorder characterized by the loss of dopaminergic neurons (DN) in the substantia nigra and disrupted cellular maintenance. Here, we demonstrate that NDST3-mediated epigenetic reprogramming halts neuronal degeneration and restores motor...

ORGANISM(S): Homo sapiens (Human)

2026-03-16 | PXD067971 | Pride

Development and validation of a method for analyzing the sialylated glycopeptides of recombinant erythropoietin in urine using LC-HRMS

1. Profiling of sialylated glycopeptides from rEPO was performed via LC–HRMS 2. LC–HRMS methods for analyzing sialylated glycopeptide in urine samples were developed 3. The method was validated and applied to detection of rEPO biosimilars in urine

ORGANISM(S): Homo sapiens (Human)

2023-05-10 | PXD038932 | Pride

Liquid chromatography Mass spectrometry Doping control Erythropoietin Sialylated glycopeptides

Gregarines impact consumption and development but not glucosinolate metabolism in the mustard leaf beetle

Gregarines are usually classified as parasites, but recent studies suggest that they should be viewed on a parasitism-mutualism spectrum and may even be seen as part of the gut microbiota of host insects. As such, they may also impact the consumption of their hosts and/or be involved in the diges...

2025-07-10 | MTBLS9816 | MetaboLights

Molecular Epidemiological Characterization of Staphylococcus argenteus Clinical Isolates in Japan: Identification of Three Clones (ST1223, ST2198, and ST2550) and a Novel Staphylocoagulase Genotype XV.

Not available

S-EPMC6843175 | biostudies-literature

Responses to chemical cross-talk between the Mycobacterium ulcerans toxin, mycolactone, and Staphylococcus aureus.

Not available

S-EPMC8175560 | biostudies-literature

ApoE4-dependent lysosomal cholesterol accumulation impairs mitochondrial homeostasis and oxidative phosphorylation in human astrocytes

Recent developments in genome sequencing have expanded the knowledge of genetic factors associated with late-onset Alzheimer’s disease (AD). Among them, genetic variant e4 of the APOE gene (ApoE4) confers the greatest disease risk. Dysregulated glucose metabolism is an early pathological feature of ...

ORGANISM(S): Homo sapiens (Human)

2023-09-12 | PXD045298 | Pride

Mitophagy Lysosomal cholesterol accumulation Apoe4 Glucose metabolism Human astrocytes

Chemical transformation of cannabidiol into psychotropic cannabinoids under acidic reaction conditions: Identification of transformed products by GC-MS.

Not available

S-EPMC10208661 | biostudies-literature

Satureja montana L. Essential Oils: Chemical Profiles/Phytochemical Screening, Antimicrobial Activity and O/W NanoEmulsion Formulations.

Not available

S-EPMC7022231 | biostudies-literature

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214 Results

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