Parkinson - OmicsDI

Show results for

Unknown (6384)
Transcriptomics (492)
Genomics (279)
Proteomics (151)
Metabolomics (27)
Genomic (19)
Clinical (6)
Methylation profiling (6)
Other (3)
Models (2)
Multiomics (2)

Organisms

Homo sapiens (351)
Mus musculus (126)
Rattus norvegicus (21)
Drosophila melanogaster (19)
Carassius auratus (8)
Caenorhabditis elegans (7)
Streptomyces venezuelae (6)
Danio rerio (6)
Arabidopsis thaliana (6)
Bos taurus (4)
Escherichia coli (4)
Saccharomyces cerevisiae (4)
Teleopsis quinqueguttata (3)
Sphyracephala beccarii (2)
Xerophyta humilis (2)
Aplysia californica (2)
Lepidium sativum (2)
Oryza sativa Japonica Group (2)
Hypericum perforatum (1)
Bathyergus suillus (1)
Miscanthus sinensis (1)
Drosophila hawaiiensis (1)
Delphinapterus leucas (1)
Microbacterium oxydans (1)
Heliothis virescens (1)
Gambusia holbrooki (1)
Cyanidioschyzon merolae (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 (1)
Canis lupus (1)
Ogataea angusta (1)

Organisms

Homo sapiens (79)
Mus musculus (37)
Rattus norvegicus (7)
Microcebus murinus (3)
Drosophila melanogaster (3)
Caenorhabditis elegans (2)
Xanthomonas sp. (1)
Syngnathidae sp. PRJNA1494570 (1)
Streptococcus mutans (1)
human metagenome (1)
human gut metagenome (1)
Saccharomyces cerevisiae (1)

Repository

biostudies-arrayexpress (450)
ENA (193)
geo (95)
pride (68)
MassIVE (48)
EGA (46)
MetaboLights (26)
dbGaP (19)
jPOST (12)
PeptideAtlas (5)
iProX (4)
PanoramaPublic (4)
EVA (2)
PAXDB (2)
ExpressionAtlas (1)
BioModels (1)
GNPS (1)
GPMDB (1)
PMR (1)

Tissue

Brain (27)
Cell culture (18)
Astrocyte (4)
Neuron of cerebral cortex (4)
HeLa cell (3)
Cerebrospinal fluid (2)
Lung (2)
Brain (1)
Blood (1)
Blood plasma (1)
Blood serum (1)
Embryonic cell (1)
Embryonic stem cell (1)
Extracellular exosome (1)
Fibroblast (1)
HEK-293 cell (1)
Heart (1)
Keratinocyte (1)
Left ventricle (1)
Midbrain dopaminergic neuron differentiation (1)
Monocyte (1)
Neuron (1)
Neuronal stem cell (1)
Primary neuron (1)
Saliva (1)
Stem cell (1)
Substantia nigra (1)

Disease

Parkinson's disease (34)
Alzheimer's disease (4)
Normal (3)
Brain cancer (2)
Lewy body dementia (2)
12 DAI with PepMV-EU isolate (1)
Glioma (1)
DNA repair deficiency (1)
Bronchioloalveolar carcinoma of lung (1)
Breast carcinoma (invasive ductal) (1)
Squamous cell carcinoma (1)
Neurologically healthy control (1)
Bordetella pertussis inoculated (1)
Locally advanced rectal cancer (1)
Cancer (1)
"hyperglycaemic, obese and insulin resistant" (1)
N/a (1)
Multiple Sclerosis (1)
Parkinson Disease (1)
Crohn Disease (1)
Infections (1)
Inflammatory Bowel Diseases (1)
Melanoma (1)
Not Available (1)
Adult respiratory distress syndrome (1)
Dementia (1)
Disease free (1)
Huntington Disease (1)
Multiple sclerosis (1)
Peripheral primitive neuroectodermal tumor (1)

Technology Type

Mass Spectrometry (68)
Shotgun proteomics (28)
Bottom-up proteomics (18)
Mass spectrometry (13)
Affinity purification coupled with mass spectrometry proteomics (13)
Mass spectrometry assay (8)
Data-dependent acquisition (5)
NMR spectroscopy (3)
Gel-based experiment (3)
Illumina HiSeq 2000 (2)
NMR spectroscopy assay (2)
SWATH MS (2)
ILLUMINA, Illumina HiSeq 2000 (1)
Illumina 1.2M, Illumina 610K Quad, Affymetrix 6.0 (1)
Affymetrix 6.0, Illumina Genome Analyzer II (1)
Illumina Genome Analyzer II (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina NovaSeq 6000 (23)
NextSeq 500 (13)
Illumina HiSeq 2000 (12)
Illumina HiSeq 4000 (7)
Illumina NovaSeq X (6)
Illumina HiSeq 2500 (5)
Illumina Genome Analyzer IIx (3)
- (3)
Sequel (2)
NA (2)
Illumina MiSeq (2)
NextSeq 550 (2)
Illumina HiSeq 3000 (2)
Tapestri Platform (1)
-- (1)
Linux Bash Scripting (1)
NEBNext Ultra II Directional RNA Library Prep (1)
Qiagen RNeasy Mini Kit (1)
With L-glutamine supplemented with 10% fetal bovine serum (FBS) (Gibco) and 1% penicillin-streptomycin (10,000 units/mL penicillin and 10 mg/mL streptomycin) (Gibco). (1)
Sequel II (1)
Affymetrix miRNA 3.1 (1)
Not Applicable (1)
Not Applicablre (1)
PacBio RS II (1)
Other (1)
Axon- GenePix4000B (1)
R (1)
TruSeq (Illumina, Novogene, Genomic Centre Cambridge, CB4 0FW, UK.) (1)
NanoDrop spectrophotometer and the Agilent 2100 Bioanalyzer (1)
Histopaque-1077,FACSAria Fusion Sorter,Flow Cytometer (1)

Publication Date

2015 (64)
2010 (61)
2025 (56)
2016 (53)
2012 (50)
2013 (49)
2014 (47)
2011 (45)
2022 (40)
2026 (39)
2024 (35)
2023 (33)
2021 (30)
2008 (26)
2018 (23)
2017 (15)
2020 (13)
2009 (11)
2007 (10)
2019 (7)
2006 (3)
2005 (2)
2004 (2)
2002 (1)

UNIPROT ID/AC

1433B_HUMAN (2)
1433F_HUMAN (2)
1433G_HUMAN (2)
1433S_HUMAN (2)
1433T_HUMAN (2)
1433Z_HUMAN (2)
2A5A_HUMAN (2)
2A5B_HUMAN (2)
2A5D_HUMAN (2)
2A5E_HUMAN (2)
2A5G_HUMAN (2)
2AAA_HUMAN (2)
2AAB_HUMAN (2)
2ABA_HUMAN (2)
2ABB_HUMAN (2)
2ABD_HUMAN (2)
2ABG_HUMAN (2)
3BP1_HUMAN (2)
3BP5L_HUMAN (2)
3HAO_HUMAN (2)
3HIDH_HUMAN (2)
3MG_HUMAN (2)
41_HUMAN (2)
4EBP1_HUMAN (2)
4EBP2_HUMAN (2)
4ET_HUMAN (2)
4F2_HUMAN (2)
5HT1A_HUMAN (2)
5HT1B_HUMAN (2)
5HT2A_HUMAN (2)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:40410 (5)
CHEBI:17754 (5)
CHEBI:17268 (5)
CHEBI:15891 (5)
CHEBI:30915 (5)
CHEBI:16737 (5)
CHEBI:16919 (5)
CHEBI:37054 (4)
CHEBI:64552 (4)
CHEBI:37714 (4)
CHEBI:13705 (4)
CHEBI:28847 (4)
CHEBI:15361 (4)
CHEBI:24996 (4)
CHEBI:31011 (4)
CHEBI:4153 (4)
CHEBI:60645 (4)
CHEBI:16530 (4)
CHEBI:16283 (4)
CHEBI:15729 (4)
CHEBI:16870 (4)
CHEBI:16977 (4)
CHEBI:4139 (4)
CHEBI:4208 (4)
CHEBI:15428 (4)
CHEBI:18147 (4)
CHEBI:4167 (4)
CHEBI:17196 (4)
CHEBI:17115 (4)
CHEBI:60425 (1)

Metabolite Name

L-Serine (7)
Taurine (6)
D-Glucose (5)
L-Alanine (5)
Betaine (5)
L-Proline (5)
N-Acetylglycine (5)
L-Arginine (5)
L-Threonine (5)
Lactate (5)
Creatinine (5)
Creatine (5)
L-Carnitine (5)
L-Phenylalanine (5)
L-GlutamicAcid (4)
2-Hydroxyisovalerate (4)
3-Hydroxybutyrate (4)
2-Hydroxybutyrate (4)
2-Oxoisovalerate (4)
L-Glycine (4)
TMAO (4)
Valerate (4)
D-Fucose (4)
L-Aspartate (4)
Myo-Inositol (4)
D-Galactose (4)
D-Fructose (4)
L-Cystine (4)
2-Oxoglutarate (4)
Glycerol (4)

First Public Date

2025 (26)
2023 (23)
2026 (22)
2021 (21)
2014 (17)
2024 (15)
2018 (12)
2022 (11)
2020 (11)
2015 (11)
2013 (10)
2016 (6)
2019 (5)
2017 (3)

Modelling Approach

Ordinary differential equation model (1)

Study status

Terminated (2)
Recruiting (2)
Active, not recruiting (1)
Completed (1)

Lab affiliation

Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (10)
Paris-Saclay Institute of Neuroscience, Team Melki, CNRS, Gif-sur-Yvette, France (8)
Department of Oncology-Pathology, Karolinska Institutet and Science for Life Laboratory, Stockholm, Sweden (2)
School of Biomedical Sciences, University of Plymouth, UK (2)
1. Department of Pharmacology & Therapeutics, McGill University, Montréal, Québec, Canada 2. Centre de Recherche en Biologie Structurale, Montréal, Québec, Canada (1)
1. German Center for Neurodegenerative Diseases (DZNE), 89081 Ulm, Germany 2. Department of Neurology, University Clinic Ulm, 89081 Ulm, Germany (1)
Associate Professor, Neuroscience, The Scripps Research Institute Florida (1)
Biotech Research and Innovation Centre (BRIC), University of Copenhagen, Copenhagen, Denmark (1)
CIR, Queen’s Medical Research Institute, University of Edinburgh (1)
Center for Integrated Protein Science Munich (CIPSM) at the Department of Chemistry, Technische Universität München, Lichtenbergstraße 4, 85747 Garching b. München ( lab head ) (1)
Center for RNA Research, Institute for Basic Science, Seoul 08826, S. Korea School of Biological Sciences, Seoul National University, Seoul 08826, S. Korea (1)
Centre for Proteomic Research B85, Life Sciences Building University of Southampton University Road Highfield Southampton, Hants. SO17 1BJ United Kingdom (1)
Centre for Proteomics and Metabolomics Leiden University Medical Centre (1)
Clinical Neuroproteomics Lab Navarrabiomed Proteored Pamplona, Spain (1)
Department of Biochemistry and Molecular Biology and Córdoba Maimónides Institute for Biomedical Research (IMIBIC), University of Córdoba (1)
Department of Biology, Faculty of Sciences-I, Lebanese University, Beirut, Lebanon (1)
Department of Chemistry, Boston College, USA (1)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (1)
Department of Forensic Genetics and Biology, School of Forensic Medicine, China Medical University, Beijing, China (1)
Department of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA (1)
Department of Molecular Systems Biology, Cell Science Research Center, Royan Institute for Stem Cell Biology and Technology, ACECR, Tehran, Iran (1)
Department of Pathophysiology, School of Basic Medical Sciences, Zhengzhou University, Zhengzhou, Henan, China (1)
Department of Structural and Computational Biology, Max Perutz Labs, University of Vienna, Austria (1)
Donnelly CCBR, University of Toronto, Toronto ON M5S 3E1, Canada (1)
Emory University School of Medicine Biochemistry Department (1)
Faculty of Biology Medicine and Health, Wellcome Trust Centre for Cell-Matrix Research, Manchester Centre University of Manchester, United Kingdom (1)
Fondazoine Pisana per la Scienza ONLUS - Via ferruccio Giovannini 13, 56107 San Giuliano Terme (PI) - Italy (1)
Forschungsinstitut für Frauengesundheit Universitäts- Frauenklinik Universitätsklinikum Tübingen Germany (1)
Head Proteomics Group, Leiden University Medical Center, Center for Proteomics and Metabolomics, PO Box 9600, Postal zone P1-Q, 2300 RC Leiden, The Netherlands (1)
IRIC - Université de Montréal (1)

Keyword

Diabete Mellitus (1)
Sickle Cell Disease (1)
Sjogren’s Syndrome (1)
Informal caregivers (1)
Cost effectiveness (1)
Cohort study (1)
Randomized study (1)
Elderly (1)
Comorbidity (1)

IsPrivate

False (1)

Classification

bacteria (1)

Modification

4-dinitrophenyl modified residue (1)

Study type

Transcription profiling by array (258)
RNA-seq of coding RNA (68)
ChIP-seq (21)
Comparative genomic hybridization by array (13)
RNA-seq of coding RNA from single cells (9)
RNA-seq of non coding RNA (9)
High-throughput sequencing (7)
Transcription profiling by tiling array (7)
Proteomic profiling by array (7)
Unknown experiment type (6)
Other (6)
ChIP-chip by array (5)
Methylation profiling by high throughput sequencing (5)
RNA-seq of total RNA (5)
Genotyping by array (4)
MicroRNA profiling by array (3)
DNA-seq (3)
Observational (3)
Transcription profiling by SAGE (2)
Cell line - One-color microarray (2)
Cell line - High-throughput sequencing (2)
Single nucleus RNA sequencing (2)
Interventional (2)
ChIP-chip by tiling array (1)
RNAi profiling by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
Bisulfite-seq (1)
ScATAC-seq (1)
Genotyping by high throughput sequencing (1)
Observational patient registry (1)

Release Date

2022 (699)
2021 (698)
2025 (690)
2024 (571)
2023 (568)
2020 (547)
2019 (408)
2018 (384)
2016 (366)
2017 (350)
2015 (285)
2014 (246)
2013 (164)
2012 (162)
2011 (148)
2010 (140)
2026 (133)
2009 (98)
2008 (68)
2007 (30)
2006 (20)
2005 (17)
2004 (15)
2002 (8)
2001 (5)
2003 (4)
2000 (4)
1998 (3)
1999 (2)
1997 (1)

Location

United States (3)
France (1)

Previous page
1 / 737
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 737
Next page

Sort by:

Relevance

Page size

Whole genome expression in Parkinson disease and neurologically healthy control prefrontal cortex Brodmann area 9 samples

ORGANISM(S): Homo sapiens

2012-09-19 | E-MTAB-812 | biostudies-arrayexpress

Transcription profiling of melanized domamine neurons isolated from male and female patients with Parkinson disease to investigate gender differences

We used 500 melanized dopamine neurons isolated from post-mortem human substantia nigra pars compacta of each sample with laser capture microdissection. Total RNA was extracted with Arcturus PicoPure RNA extraction kit and amplified two times with Arcturus RiboAmp RNA amplification kit. the samples ...

ORGANISM(S): Homo sapiens

2008-01-19 | E-MEXP-1416 | biostudies-arrayexpress

Mitochondrial contagion induced by Parkin deficiency in Drosophila hearts and its containment by suppressing mitofusin; germline Parkin knockout mouse hearts.

Dysfunctional Parkin-mediated mitophagic culling of senescent or damaged mitochondria is a major pathological process underlying Parkinson disease and a potential genetic mechanism of cardiomyopathy. Despite epidemiological associations between Parkinson disease and heart failure, the role of Parkin...

ORGANISM(S): Mus musculus

2015-10-31 | E-GEOD-74517 | biostudies-arrayexpress

Transcription profiling of human substantia nigra from postmortem brain of Parkinsons disease patients (PD)

We used microarrays to detail the global program of gene expression underlying Parkinson's disease Experiment Overall Design: Substantia nigra tissue from postmortem brain of normal and Parkinson disease patients were used for RNA extraction and hybridization on Affymetrix microarrays: 9 replicates ...

ORGANISM(S): Homo sapiens

2008-11-06 | E-GEOD-7621 | biostudies-arrayexpress

Microarrays of frontal cortex (area 8) of Parkinson cases and controls

ORGANISM(S): Homo sapiens

2013-06-02 | E-MTAB-1194 | biostudies-arrayexpress

Whole Exome Sequencing in Familial Parkinson Disease

We have an ongoing study that has recruited families having at least a sibling pair with Parkinson disease (PD). Families have been screened for mutations in known PD causative genes (LRRK2, parkin, etc). Following review of families without a causative mutation, we selected families for ...

phs000376.v1.p1 | EGA

Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations

This SuperSeries is composed of the following subset Series: GSE29772: CNV analysis for Generation of isogenic pluripotent stem cells differing exclusively at two early onset Parkinson point mutations GSE29773: Gene Expression Data for Generation of isogenic pluripotent stem cells differing exclusiv...

ORGANISM(S): Homo sapiens

2011-07-25 | E-GEOD-29774 | biostudies-arrayexpress

MiRNA expression profiling in Parkinson disease patients from Heavy metal exposer and non exposer group with respective control

Peripheral blood samples were collected from (Heavy metal exposer- Parkinson disease)HME-PD, (Heavy metal non-exposer- Parkinson disease) NHME-PD, and healthy controls. Total RNA was isolated and profiled using the Affymetrix GeneChip™ miRNA 3.1 Array. Arrays were hybridized, washed, stained, scanne...

ORGANISM(S): Homo sapiens

2026-08-31 | E-MTAB-17484 | biostudies-arrayexpress

Parkinson Disease Frontal Cortex Transcriptomic analysis

PRJNA659523 | ENA

Proteomics on post-mortem human brain tissue of patients with Alzheimer`s, Parkinson`s and Lewy body dementias.

We have used HiRIEF (High Resolution Isoelectric Focusing) LC-MS proteomics with isobaric tags (TMT10plex) to compare 32 post-mortem human brains in the prefrontal cortex (Brodmann area 9) of prospectively followed patients with Alzheimer`s disease (AD), Parkinson`s disease with dementia (PDD), deme...

ORGANISM(S): Homo sapiens (Human)

2017-12-08 | PXD006122 | Pride

Previous page
1 / 737
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 737
Next page

Sort by:

Relevance

Page size

7369 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

First Public Date

Modelling Approach

Study status

Lab affiliation

Tags

Keyword

IsPrivate

Classification

Modification

Study type

Release Date

Location

OmicsDI is part of the ELIXIR infrastructure

Tweets