Silva E C EC - OmicsDI

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Unknown (444)
Metabolomics (10)
Transcriptomics (9)
Proteomics (3)

Organisms

Homo sapiens (8)
Xylella fastidiosa (2)
Ectocarpus siliculosus (1)
Caenorhabditis elegans (1)

Repository

biostudies-arrayexpress (9)
MetaboLights (9)
pride (3)
GNPS (1)

Tissue

Blood plasma (1)
Tear (1)

Disease

Chikungunya (1)
Diabetes (1)
Retinopathy (1)

Technology Type

Mass spectrometry (8)
Mass Spectrometry (3)
Shotgun proteomics (2)
Mass spectrometry assay (1)
Bottom-up proteomics (1)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (7)
Illumina NovaSeq 6000 (2)
LTQ FT (1)
MaXis (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive (1)

Publication Date

2023 (7)
2016 (3)
2026 (2)
2015 (2)
2007 (2)
2024 (2)
2022 (2)
2010 (1)
2025 (1)

CHEBI ID

CHEBI:16359 (3)
CHEBI:28865 (3)
CHEBI:35038 (3)
CHEBI:116314 (2)
CHEBI:139138 (2)
CHEBI:143745 (2)
CHEBI:143757 (2)
CHEBI:173703 (2)
CHEBI:182784 (2)
CHEBI:195271 (2)
CHEBI:27432 (2)
CHEBI:27997 (2)
CHEBI:30769 (2)
CHEBI:34494 (2)
CHEBI:34687 (2)
CHEBI:64563 (2)
CHEBI:73858 (2)
CHEBI:75342 (2)
CHEBI:80774 (2)
CHEBI:10136 (1)
CHEBI:131342 (1)
CHEBI:138126 (1)
CHEBI:139305 (1)
CHEBI:142245 (1)
CHEBI:1427 (1)
CHEBI:145227 (1)
CHEBI:15422 (1)
CHEBI:15603 (1)
CHEBI:15741 (1)
CHEBI:15781 (1)

Metabolite Name

Cholic acid (3)
Tris(2-butoxyethyl) phosphate (3)
(2S,3S,4S,5R,6R)-6-[[(3S,4S,6aR,6bS,8aR,9R,12aS,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid (2)
1-({[2-(2-furylmethyl)-5-methylpyrrolidinyl]amino}methylene)-7-[8-({[2-(2-fury lmethyl)pyrrolidinyl]amino}methylene)-1,6-dihydroxy-3-methyl-5-(methylethyl)-7 -oxo(2-naphthyl)]-3,8-dihydroxy-6-methyl-4-(methylethyl)naphthalen-2-one (2)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphocholine (2)
2,6-Di-tert-butyl-4-hydroxymethylphenol (2)
9(10)-EpOME (2)
Alpha-linolenic acid|linolenic acid|(9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid (2)
Dibutyl phthalate (DBP) (2)
Elaidic acid (2)
Lyso-PC(16:0) (2)
Monoolein (2)
NCGC00385123-01_C22H30O6_7b,9-Dihydroxy-3-(hydroxymethyl)-1,1,6,8-tetramethyl-5-oxo-1,1a,1b,4,4a,5,7a,7b,8,9-decahydro-9aH-cyclopropa[3,4]benzo[1,2-e]azulen-9a-yl acetate (2)
Succinate (2)
Taurocholic acid (2)
(R)-4-((3R,4R,5S,8S,9S,10R,13R,14S,17R)-3,4-dihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
(R)-4-((3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-3,7,12-trihydroxy-10,13-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-17-yl)pentanoic acid (1)
1,3,5-triprop-2-enyl-1,3,5-triazaperhydroine-2,4,6-trione (1)
1,4a-dimethyl-9-oxo-7-propan-2-yl-3,4,10,10a-tetrahydro-2H-phenanthrene-1-carboxylic acid (1)
1-(9Z-Octadecenoyl)-sn-glycero-3-phosphocholine (1)
1-Heptadecanoyl-sn-glycero-3-phosphocholine (1)
1-Hexadecanoyl-sn-glycerol (1)
1-Hexadecyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-2-stearoyl-sn-glycero-3-phosphocholine (1)
1-Myristoyl-sn-glycero-3-phosphocholine (1)
1-Palmitoyl-2-myristoyl-sn-glycero-3-phosphocholine (1)
13(S)-HODE methyl ester (1)
13-(Z)-Docosenamide (1)
13-Keto-9Z,11E-octadecadienoic acid (1)
16-Hydroxyhexadecanoic acid (1)

Study type

Transcription profiling by array (4)
Unknown experiment type (1)
Transcription profiling by tiling array (1)
Spatial transcriptomics by high-throughput sequencing (1)
Single nucleus RNA sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2021 (90)
2022 (75)
2023 (65)
2024 (45)
2025 (39)
2020 (31)
2019 (15)
2018 (15)
2015 (13)
2016 (10)
2026 (9)
2017 (9)
2014 (8)
2013 (7)
2011 (6)
2012 (4)
2007 (3)
2010 (2)
2009 (2)
2005 (1)
2004 (1)
2003 (1)
2001 (1)
2000 (1)

Lab affiliation

Institute of Molecular Biology (1)
Professor of Biochemistry Chair of the Dept. of Biochemistry and Tissue Biology Head of the Laboratory of Neuroproteomics University of Campinas (UNICAMP), Brazil. (1)
Univ Coimbra, Coimbra Institute for Clinical and Biomedical Research (iCBR), Faculty of Medicine, Coimbra, Portugal. (1)

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Flavonoids as Potential Modulators of Pancreatic Lipase Catalytic Activity.

Not available

S-EPMC11859905 | biostudies-literature

TcTI, a Kunitz-type trypsin inhibitor from cocoa associated with defense against pathogens.

Not available

S-EPMC8758671 | biostudies-literature

Enzymatic Pretreatment with Laccases from Lentinus sajor-caju Induces Structural Modification in Lignin and Enhances the Digestibility of Tropical Forage Grass (Panicum maximum) Grown under Future Climate Conditions.

Not available

S-EPMC8431176 | biostudies-literature

Regulatory T cells promote endurance exercise adaptation by shielding muscle mitochondria from damage

Exercise enhances physical performance and reduces the risk of many disorders such as cardiovascular disease, type 2 diabetes, dementia and cancer. Exercise characteristically incites an inflammatory response, notably in skeletal muscles. While some effector mechanisms have been identified, regul...

2023-10-10 | MTBLS8391 | MetaboLights

Bloodstream and catheter-related infections due to different clones of multidrug-resistant and biofilm producer Corynebacterium striatum.

Not available

S-EPMC6664767 | biostudies-literature

Plasmid-encoded toxin defence mediates mutualistic microbial interactions

Gut environments harbour dense microbial ecosystems in which plasmids are widely distributed. Plasmids facilitate the exchange of genetic material among microorganisms while enabling the transfer of a diverse array of accessory functions. However, their precise impact on microbial community compo...

2023-08-10 | MTBLS7248 | MetaboLights

Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing.

Long noncoding RNAs (lncRNAs) are non-protein coding RNAs regulating gene expression. Although for some lncRNAs a relevant role in hypoxic endothelium has been shown, the regulation and function of lncRNAs is still largely unknown in the vascular physio-pathology. Taking advantage of next-generation...

ORGANISM(S): Homo sapiens

2016-08-25 | E-GEOD-76743 | biostudies-arrayexpress

Implication of Long noncoding RNAs in the endothelial cell response to hypoxia II.

ORGANISM(S): Homo sapiens

2016-08-25 | E-GEOD-76739 | biostudies-arrayexpress

Weighted simulations redefining quadratic calibration: democratisation of analytical uncertainty evaluation.

Not available

S-EPMC13473300 | biostudies-literature

HLA-DQB1 6672G>C (rs113332494) is associated with clozapine-induced neutropenia and agranulocytosis in individuals of European ancestry.

Not available

S-EPMC8042025 | biostudies-literature