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MetabolomicsSerine and 1-carbon metabolism are required for HIF-mediated protection against retinopathy of prematurity
We determined which metabolic pathways are activated by hypoxia-inducible factor 1-mediated (HIF-1-mediated) protection against oxygen-induced retinopathy (OIR) in newborn mice, the experimental correlate to retinopathy of prematurity, a leading cause of infant blindness. HIF-1 coordinates the chang...
2019-07-05 | MTBLS856 | MetaboLights
UnknownAltered chromatin recruitment by FOXA1 mutations promotes androgen independence and prostate cancer progression.
Not available
S-EPMC6796844 | biostudies-literature
GenomicsFOXA1 potentiates lineage-specific enhancer activation through modulating TET1 expression and function
FOXA1 is a FKHD family protein that translates epigenetic signatures at target enhancers to lineage-specific transcription and differentiation. Through genome-wide location analyses, here we show that FOXA1 expression and occupancy are, in turn, required for the maintenance of this epigenetic signat...
ORGANISM(S): Homo sapiens 
2016-07-22 | E-GEOD-73363 | biostudies-arrayexpress
ProteomicsSupervised learning predicts the in vivo fate of engineered nanomaterials
Despite having exquisite control over nanoparticle design, controlling nanoparticle fate in vivo remains a major barrier for clinical translation. This is because we do not understand how nanoparticles interact with the surrounding environment in vivo and how this lack of control contributes towards...
ORGANISM(S): Mus musculus (Mouse) 
2024-09-14 | PXD011354 | Pride
Nanoparticles Protein corona Mass spectrometry Neural networks Predictive biology 
UnknownPolycomb- and Methylation-Independent Roles of EZH2 as a Transcription Activator.
Not available
S-EPMC6342284 | biostudies-literature
UnknownIntegrated molecular and functional characterization of the intrinsic apoptotic machinery identifies therapeutic vulnerabilities in glioma.
Not available
S-EPMC11582606 | biostudies-literature
ProteomicsBioplatforms Australia: Antibiotic Resistant Sepsis Pathogens Framework Initiative - Klebsiella pneumoniae complex
The Antibiotic Resistant Sepsis Pathogens Framework Initiative aims to develop a framework dataset of 5 sepsis pathogens (5 strains each) using an integrated application of genomic, transcriptomic, metabolomic and proteomic technologies. The pathogens included in this initiative are: Escherichia col...
ORGANISM(S): Klebsiella variicola Homo sapiens (Human) Klebsiella pneumoniae 
2021-07-05 | PXD016672 | Pride
Proteomics Rpmi Swath Klebsiella pneumoniae Sera Antibiotic resistance Sepsis 
TranscriptomicsTranscription profiling of uteri from mice treated with 17beta-estradiol for different durations to study the molecular mechanism for estrogen induced uterine growth.
Immature (19/20 days of age) Alpk:APfCD-1 mice were treated with arachis oil (AO) vehicle or 0.4mg/kg 17beta-estradiol (E2), via a single subcutaneous injection, and sacrificed at 1hr, 2hr, 4hr, 8hr, 24hr, 48hr, 72hr post dose.
ORGANISM(S): Mus musculus 
2007-09-22 | E-GEOD-2195 | biostudies-arrayexpress
ProteomicsStappia 28M-7 - Three new deep-sea bacteria isolated from Atlantic sponges and evidence for the biosynthesis of the antimicrobial thiazole alkaloid agrochelin
OSMAC guided bioprospecting of Atlantic sponges reveals novel bacterial species and evidence for the antimicrobial thiazole alkaloid agrochelin II A tandem mass spec data file from the crude extract of Stappia 28M-7 Taxonomy ID: 2762596
ORGANISM(S): Stappia (ncbitaxon:152161) 
2025-08-11 | MSV000098784 | MassIVE
ProteomicsProteogenomics Connects Somatic Mutations to Signalling in Breast Cancer
Explore This Study at the NCI Proteomic Data Commons

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) 
2019-08-28 | MSV000084248 | MassIVE
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