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ProteomicsSouthern ocean mesocosm metaproteomics
Mesocosms (600 L) were deployed at the Southern Ocean Time Series (SOTS) in Austral late summer during a high nutrient, low chlorophyll period. One mesocosm represented control, present-day conditions (high nutrients/low temperature/low pCO2/low Fe/low irradiance), while the other was amended to rep...
ORGANISM(S): phytoplankton environmental sample 
2022-10-26 | PXD021185 | Pride
Mesocosm Sots Phytoplankton Southern ocean Dda Metaproteomics 
MetabolomicsA metabolomics dataset of plankton exometabolomes and dissolved organic compounds in the South Atlantic Ocean

The marine microbiome contributes to nearly half of our planet’s net primary production. It plays a central role in the ocean’s carbon cycle through both passive and active release of metabolites into seawater, forming a pool of dissolved compounds known as the marine exometabolome.


2026-05-19 | MTBLS14508 | MetaboLights
Genomicsthe sediment of the Southern Ocean
the sediment of the Southern Ocean Raw sequence reads
PRJNA1180744 | ENA
GenomicsRaw sequences reads of S37 eDNA metabarcoding in the Southern Ocean
Raw sequences reads of S37 eDNA metabarcoding in the Southern Ocean Raw sequence reads
PRJNA939976 | ENA
UnknownScaling up ocean conservation through recognition of key biodiversity areas in the Southern Ocean from multispecies tracking data.
Not available
S-EPMC11780204 | biostudies-literature
TranscriptomicsMolecular analysis of endocrine disruption in hornyhead turbot captured from wastewater treatment plant discharge locations in Southern California
Hornyhead turbot (Pleuronichthys verticalis) captured near sewage outfalls are used as sentinel fish for monitoring exposure to industrial and agricultural chemicals of ~20 million people living in coastal southern California. Although analyses of hormones in blood and organ morphology and histology...
ORGANISM(S): Pleuronichthys verticalis 
2013-12-10 | E-MEXP-3852 | biostudies-arrayexpress
ProteomicsExploration of Artificial Intelligence-Based Spectral Libraries for Data Independent Acquisition in Complex Ocean Metaproteomic Analyses
Ocean metaproteomics provides valuable insights into the structure and function of marine microbial communities. Yet, ocean samples are challenging due to their extensive biological diversity that results in a very large number of peptides with a large dynamic range. This study characterized the cap...
ORGANISM(S): environmental samples <bacteria Bacteria 
2025-09-29 | PXD057948 | Pride
Dda dia ocean metaproteomics proteomics 
UnknownBacterial distribution in Twilight zone of the Indian sector of Southern Ocean: V3- V4 rDNA hypervariable region data.
Not available
S-EPMC9801073 | biostudies-literature
GenomicsBacteria of the deep Southern Ocean
Diversity and community composition of particle associated and free-living bacteria in the deep Southern Ocean
PRJEB14709 | ENA
UnknownStorms drive outgassing of CO2 in the subpolar Southern Ocean.
Not available
S-EPMC8748750 | biostudies-literature
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