Souza R R - OmicsDI

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Unknown (2608)
Proteomics (100)
Transcriptomics (29)
Metabolomics (21)
Genomics (10)

Organisms

Homo sapiens (74)
Mus musculus (18)
Saccharomyces cerevisiae (8)
Rattus norvegicus (6)
Escherichia coli (4)
Clostridium autoethanogenum (3)
Aspergillus fumigatus (2)
Klebsiella pneumoniae (2)
Klebsiella variicola (2)
Portulaca oleracea (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Sus scrofa domesticus (2)
Paenibacillus riograndensis SBR5 (1)
Paracoccidioides brasiliensis (1)
Hordeum vulgare (1)
190486 (1)
Aedes aegypti (1)
Bos taurus (1)
Botrytis cinerea (1)
Carica papaya (1)
Cricetulus griseus (1)
Rhinocladiella similis (1)
Toxoplasma gondii PRU (1)
Toxoplasma gondii VEG (1)
Trichomonas vaginalis (1)
Vigna mungo (1)

Repository

pride (89)
biostudies-arrayexpress (30)
MetaboLights (19)
EGA (9)
MassIVE (9)
GNPS (2)
PanoramaPublic (2)

Tissue

Cell culture (31)
Brain (10)
Cerebrospinal fluid (5)
Kidney (4)
Permanent cell line cell (4)
Cell suspension culture (3)
Colon (3)
Plant cell (3)
Prokaryotic cell (3)
Saliva (3)
Adrenal gland (2)
Blood plasma (2)
Chondrocyte (2)
Cotyledon (2)
Diploid cell (2)
Epithelial cell (2)
Fibroblast (2)
HeLa cell (2)
Kidney cell (2)
Articular cartilage (1)
Blood (1)
Blood cell (1)
Blood serum (1)
Bone marrow (1)
Dorsal striatum (1)
Endothelial cell of umbilical vein (1)
Esophagus (1)
Flower bud (1)
Jump-In-T-REx HEK293 cell (1)
Leydig cell (1)

Disease

Parkinson's disease (4)
Disease free (3)
Acute leukemia (1)
Autoimmune lymphoproliferative syndrome (1)
Barrett's esophagus (1)
COVID-19 (1)
Chikungunya (1)
Colon cancer (1)
Head and neck cancer (1)
Lewy body dementia (1)
Lung cancer (1)
Melanoma (1)
Multiple system atrophy (1)
Obesity (1)
Osteoarthritis (1)
Plasmodium falciparum malaria (1)
Salmonellosis (1)
Schizophrenia (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (89)
Shotgun proteomics (41)
Mass spectrometry (18)
SWATH MS (16)
Bottom-up proteomics (15)
Data-independent acquisition (10)
Affinity purification coupled with mass spectrometry proteomics (5)
HDMSE (5)
Top-down proteomics (4)
Data-dependent acquisition (3)
All-ion fragmentation (2)
Gel-based experiment (2)
Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina MiSeq (1)
NMR spectroscopy (1)
Affinity proteomics (1)
MSE (1)
Olink affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Illumina NovaSeq 6000 (3)
Orbitrap Exploris 480 (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
MoFlo XDP (Beckman Coulter) or a FACSAria II (Becton Dickinson) (1)
Fluidigm C1 autoprep system (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
6545 Q-TOF LC/MS (1)
7890A GC coupled to a 5975C inert XL MSD, with a 7683 series injector (G2614A) (1)
LTQ Orbitrap Velos (1)
LTQ (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
LTQ XL (1)
MS:1000031 (1)
Orbitrap QExactive Plus (1)
Q Exactive (1)
Q-Exactive (Thermo Fisher) (1)
Agilent 5975C GC/MSD (1)
Agilent 6520 series quadrupole time-of-flight mass spectrometer (QTOF MS) (1)
Bruker (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Gas Chromatography MS - (1)

Publication Date

2022 (22)
2025 (19)
2021 (16)
2024 (14)
2023 (14)
2026 (14)
2020 (10)
2018 (9)
2011 (6)
2017 (5)
2016 (3)
2014 (3)
2013 (3)
2010 (3)
2019 (3)
2015 (2)
2012 (2)
2009 (1)
2008 (1)
2004 (1)

CHEBI ID

CHEBI:18186 (9)
CHEBI:28044 (9)
CHEBI:15428 (8)
CHEBI:27897 (8)
CHEBI:6650 (8)
CHEBI:16449 (7)
CHEBI:17822 (7)
CHEBI:22653 (7)
CHEBI:22660 (7)
CHEBI:25094 (7)
CHEBI:30769 (7)
CHEBI:15741 (6)
CHEBI:16708 (6)
CHEBI:16811 (6)
CHEBI:18237 (6)
CHEBI:24898 (6)
CHEBI:25017 (6)
CHEBI:26271 (6)
CHEBI:27570 (6)
CHEBI:28300 (6)
CHEBI:15354 (5)
CHEBI:15978 (5)
CHEBI:16010 (5)
CHEBI:16027 (5)
CHEBI:16235 (5)
CHEBI:16335 (5)
CHEBI:16695 (5)
CHEBI:16704 (5)
CHEBI:17154 (5)
CHEBI:17568 (5)

Metabolite Name

AMP (4)
Alanine (4)
Asparagine (4)
Glutamine (4)
Glycine (4)
Isoleucine (4)
Leucine (4)
Lysine (4)
Methionine (4)
Phenylalanine (4)
Proline (4)
Serine (4)
Tryptophan (4)
Tyrosine (4)
Valine (4)
Adenine (3)
Allantoin (3)
Arginine (3)
Citrulline (3)
Creatine (3)
Creatinine (3)
Histidine (3)
Homoserine (3)
Malic acid (3)
Ornithine (3)
Phenylalanine (3)
Taurine (3)
Threonine (3)
UMP (3)
Uracil (3)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)

Study type

Transcription profiling by array (21)
RNA-seq of coding RNA (6)
ATAC-seq (1)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (336)
2025 (317)
2023 (307)
2021 (298)
2024 (272)
2020 (220)
2019 (158)
2018 (139)
2017 (100)
2016 (78)
2015 (78)
2014 (67)
2026 (58)
2013 (45)
2011 (42)
2012 (39)
2010 (30)
2009 (17)
2008 (10)
2007 (7)
2004 (4)
2006 (4)
2005 (4)
2003 (4)
2002 (3)
1998 (1)

Lab affiliation

Bioplatforms Australia (7)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland (5)
IMSB, ETH Zurich (4)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia. (2)
Institute of Molecular Systems Biology, Department of Biology, ETH Zurich, Zurich, Switzerland. (2)
Institute of Molecular Systems Biology, ETH Zurich (2)
Professor of Pharmacology, Duke University (2)
Adult Cancer Program, Faculty of Medicine, Lowy Cancer Research Centre, University of New South Wales Sydney, NSW, Australia (1)
Analytical Biochemistry and Proteomics Unit (1)
Australian Institute for Bioengineering and Nanotechnolog (AIBN), The University of Queensland (1)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland (1)
Australian Institute for Bioengineering and Nanotechnology (AIBN), The University of Queensland, Australia (1)
Biognosys AG (1)
Biognosys AG, Schlieren, Switzerland (1)
Biognosys AG, Schlieren, Switzerland (Dr. Lukas Reiter, lukas.reiter@biognosys.com) Institute of Molecular System Biology, ETH Zurich, Zurich, Switzerland (Prof. Dr. Paola Picotti, picotti@imsb.biol.ethz.ch) (1)
Bioplatforms Australia (project manager) (1)
CENTD, Instituto Butantan (1)
Center for Technological Development in Health, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil (1)
Centre of Excellence in New Target Discovery (CENTD), Butantan Institute, Sao Paulo, Brazil. (1)
Departamento de Fisiologia, Laboratório de Fisiologia da Nutrição, Universidde Federal de São Paulo, Brasil (1)
Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil (1)
Department of Biological Sciences, Boise State University, Boise, ID, USA (1)
Department of Biology, Faculty of Chemistry, National Autonomous University of Mexico (UNAM), (1)
Department of Cardiology, Smidt Heart Institute and Proteomics and Metabolomics Core Facility (1)
Department of Chemistry, Federal University of São Carlos, 13565-905 São Carlos, SP, Brazil (1)
Department of Genetics and Molecular Biology, Cinvestav-IPN (1)
Department of Genetics and Molecular Biology, Cinvestav-IPN. (1)
Department of Immunology, Oslo University Hospital Rikshospitalet, PO Box 4950 Nydalen, 0424 Oslo, Norway (1)
Department of Medical Microbiology and Immunology, the University of California Davis Schoolof Medicine, 1275 Health Sciences Drive, Tupper Hall 3134, Davis, CA 95616, USA. Tel: 530-754-3074 (1)

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The state of Sergipe contribution to GH research: from Souza Leite to Itabaianinha syndrome.

Not available

S-EPMC10118753 | biostudies-literature

Cryo-EM reveals a phosphorylated R-domain envelops the NBD1 catalytic domain in an ABC transporter.

Not available

S-EPMC11361370 | biostudies-literature

Universal health coverage and factors associated with enrolment in the town of Souza-Cameroon.

Not available

S-EPMC12536530 | biostudies-literature

Potential of [¹¹C](R)-PK11195 PET Imaging for Evaluating Tumor Inflammation: A Murine Mammary Tumor Model.

Not available

S-EPMC9786563 | biostudies-literature

Synthetic Process Development of (R)-(+)-1,2-Epoxy-5-hexene: An Important Chiral Building Block.

Not available

S-EPMC11334172 | biostudies-literature

Levoglucosenone as a starting material for cascade continuous-flow synthesis of (R)-γ-carboxy-γ-butyrolactone.

Not available

S-EPMC11521107 | biostudies-literature

New species and new records of Monohelea Kieffer (Diptera, Ceratopogonidae) from Brazil.

Not available

S-EPMC9836651 | biostudies-literature

Corn Cob as a Green Support for Laccase Immobilization-Application on Decolorization of Remazol Brilliant Blue R.

Not available

S-EPMC9409158 | biostudies-literature

In-depth quantitative proteomic analysis of trophozoites and pseudocysts of Trichomonas vaginalis r

Trichomonas vaginalis is a sexually transmitted anaerobic parasite that infects humans causing trichomoniasis, a common and ubiquitous sexually transmitted disease. The life cycle of this parasite presents a trophozoite form without a cystic stage. However, the presence of spherical forms with inter...

ORGANISM(S): Trichomonas vaginalis

2022-03-01 | PXD009721 | Pride

Limited permissibility of ENL-R and Mv-1-Lu mink cell lines to SARS-CoV-2.

Not available

S-EPMC9597503 | biostudies-literature

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2768 Results

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