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MetabolomicsMulti-omics profiling identifies MAPK signaling suppression associated with tetracycline-induced root toxicity in soybean
Tetracycline (TC), a widely used veterinary antibiotic, is a pervasive emerging contaminant threatening crop production. Here, we employed integrated physiological, metabolomic, and transcriptomic analyses to decipher the response of soybean (Glycine max L.) to TC. While seed germination was unaffec...
2026-09-07 | MTBLS15077 | MetaboLights
MetabolomicsSoil legacy effects in Soybean Intercropping Enhance Tobacco Resistance to Fusarium Root Rot

Soil-borne diseases, with their high incidence and frequency in monoculture systems, pose a major challenge in contemporary agricultural production. Intercropping can promote beneficial soil legacy effects, thereby effectively mitigating the occurrence and damage of soil-borne diseases. In this s...

2025-09-05 | MTBLS12940 | MetaboLights
MetabolomicsWild soybean rhizosphere microbiomes buffer continuous cropping obstacles in cultivated soybean via functional cross-kingdom synthetic communities

A cross-kingdom synthetic community (SSC) derived from wild soybean rhizosphere soil was constructed and inoculated onto cultivated soybeans suffering from continuous cropping obstacles. Root exudates from cultivated soybeans were collected before and after inoculation with the SSC via a hydropon...

2026-03-14 | MTBLS13803 | MetaboLights
MetabolomicsEarly Soybean-Nematode Interactions: Transcriptomic Responses of Meloidogyne incognita at the Pre-Parasitic Stage and Metabolomic Profiling of Root Exudates

This dataset provides comprehensive metabolomic profiles from three experimental treatments involving Meloidogyne incognita and soybean root exudates. The data supports investigations into biochemical pathways and key metabolites associated with early plant-nematode interactions and serves as a r...

2025-05-12 | MTBLS11929 | MetaboLights
TranscriptomicsComparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
RNA-seq analysis of soybean root transcriptomes with high (Conrad and AC Colombe) and low (AC Glengarry and Pagoda) isoflavonoid content
ORGANISM(S): Glycine max 
2017-02-01 | E-MTAB-4929 | biostudies-arrayexpress
ProteomicsShotgun proteomics of soybean root nodules infected by Bradyrhizobium japonicum
Global bottom-up proteomics analysis of proteins purified from soybean root nodules infected with either WT or nifH- mutant Bradyrhizobium japonicum. Nine glycoproteins containing Lewis-a N-glycans, with 3 distinct Lewis-a epitopes (Hex:5 HexNAc:4 dHex:3 Pent:1, Hex:4 HexNAc:4 dHex:2 Pent:1, and Hex...
ORGANISM(S): Glycine Max (ncbitaxon:3847) 
2022-01-31 | MSV000088754 | MassIVE
OtherPhosphoproteomics Reveals the Effect of Ethylene in Soybean Root under Flooding Stress.
Data from ProteomeXchange, PXD ID: PXD000898. File: 51 0 4.mgf. Published as part of J Proteome Res. 2014 Oct 24 . From the Abstract: {{i}} To explore the flooding-responsive mechanisms in early-stage soybean, a phosphoproteomic approach was used. Two-day-old soybean plants were treated without or ...
ORGANISM(S): Glycine_max 
GPM32310004941 | GPMDB
Resource Reanalysis 
MetabolomicsIntegrated transcriptome and metabolome profiling unveils the tolerance network to potassium deficiency in wild soybean ecotypes

Facing the severe challenge of global soil potassium deficiency on crop production, two different ecological row types of wild soybean [ Glycine soja sieb. & Zucc. In order to reveal the physiological and molecular mechanisms of tolerance to low potassium stress in glycine soja, we compared t...

2025-07-22 | MTBLS12758 | MetaboLights
MetabolomicsIntegrated transcriptomic and metabolic profiling reveals the molecular mechanism of improved nitrogen metabolism in walnut (Juglans regia L.) roots mediated by soybean intercropping

The practice of intercropping young walnut orchards with soybeans has emerged as a promising approach within the framework of sustainable agricultural management. However, the precise impacts of soybean intercropping on nitrogen metabolism in walnut roots remain insufficiently elucidated. This st...

2026-01-19 | MTBLS13719 | MetaboLights
ProteomicsProteomic analysis of soybean root including hypocotyl during recovery after drought stress
Soybean is a nutritionally important crop that exhibits reductions in growth and yields under drought stress. To investigate soybean responses during post-drought recovery, a gel-free proteomic technique was used to examine the protein profile. Two-day-old soybeans were stressed with drought for 4 d...
ORGANISM(S): Glycine max 
2016-06-16 | PXD003650 | Pride
Proteomics Recovery Root Soybean Drought 
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