Spermatogonia - OmicsDI

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cellular organisms (1)

Organisms

Mus musculus (308)
Homo sapiens (30)
Drosophila melanogaster (17)
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Rattus norvegicus (6)
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Type A spermatogonium (1)

Disease

Testicular seminoma (1)
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2009 (7)
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2005 (1)
2006 (1)
2004 (1)

CHEBI ID

CHEBI:16750 (2)
CHEBI:16393 (2)
CHEBI:16347 (2)
CHEBI:176360 (1)
CHEBI:176357 (1)
CHEBI:176349 (1)
CHEBI:176345 (1)
CHEBI:31968 (1)
CHEBI:176352 (1)
CHEBI:31442 (1)
CHEBI:28299 (1)
CHEBI:75630 (1)
CHEBI:75632 (1)
CHEBI:75643 (1)
CHEBI:176355 (1)
CHEBI:80441 (1)
CHEBI:28064 (1)
CHEBI:176415 (1)
CHEBI:176414 (1)
CHEBI:172555 (1)
CHEBI:176413 (1)
CHEBI:176412 (1)
CHEBI:81563 (1)
CHEBI:34102 (1)
CHEBI:176411 (1)
CHEBI:176410 (1)
CHEBI:176409 (1)
CHEBI:168901 (1)
CHEBI:176408 (1)
CHEBI:176407 (1)

Metabolite Name

Malvidin 3-O-arabinoside (1)
Peonidin 3-O-arabinoside (1)
Peonidin 3-O-galactoside (1)
Pelargonidin 3-O-arabinoside (1)
Pelargonidin 3-O-galactoside (1)
Cyanidin 3-O-arabinoside (1)
Delphinidin 3-O-rutinoside (1)
Cyanidin 3-O-glucoside (1)
Cyanidin 3-O-rutinoside (1)
Pelargonidin 3-O-rutinoside (1)
Cyanidin 3-O-(6-O-malonyl-beta-D-glucoside) (1)
Cyanidin 3-O-galactoside (1)
Peonidin 3-O-glucoside (1)
Procyanidin B2 (1)
Procyanidin B3 (1)
Procyanidin B1 (1)
Methacholine (1)
Noravicholic acid (1)
3alpha,9alpha-Dihydroxy-11-oxo-5beta-cholan-24-oic Acid (1)
5,7,3',4'-Tetrahydroxy-4-phenylcoumarin 5-O-glucoside (1)
Scyphostatin A (1)
PC(18:0/20:4(5Z,8Z,10E,14Z)(12OH[S])) (1)
17-hydroxy stearic acid (1)
5-Deoxy-5-<WBR>(methylthio)adenosine (1)
5beta-Cholanic acid-3alpha,12alpha-diol N-(2-sulphoethyl)-amide (1)
Sphingosine-phosphate? (split peak?) (1)
No KEGG hit - C12H22N4O5 (1)
DDTDP plasticizer (1)
No KEGG hit (1)
EDTA? (1)

First Public Date

2025 (77)
2024 (68)
2023 (52)
2021 (44)
2026 (41)
2022 (36)
2019 (33)
2020 (30)
2014 (28)
2018 (27)
2017 (25)
2015 (10)
2016 (8)
2013 (8)

Study type

Transcription profiling by array (41)
RNA-seq of coding RNA (14)
ChIP-seq (7)
Methylation profiling by high throughput sequencing (7)
RNA-seq of non coding RNA (7)
Bisulfite-seq (3)
Comparative genomic hybridization by array (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of total RNA (2)
Unknown experiment type (1)
Differential (1)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
ATAC-seq (1)
MicroRNA profiling by array (1)
CUT&RUN (1)

Release Date

2022 (98)
2023 (95)
2025 (88)
2020 (82)
2021 (81)
2024 (71)
2019 (68)
2016 (56)
2015 (56)
2018 (51)
2014 (50)
2017 (50)
2013 (42)
2012 (38)
2011 (23)
2010 (23)
2009 (22)
2008 (18)
2007 (13)
2005 (9)
2026 (7)
2006 (7)
2004 (3)
2001 (2)
2003 (1)

Lab affiliation

City University of Hong Kong (3)
BGI-Shenzhen,China (1)
Centre for Reproductive Health, Hudson Institute of Medical Research, Melbourne, VIC 3168, Australia (1)
Department of Chemistry, Michigan State University (1)
Dr. Jeremy Balsbaugh, Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269 (1)
Laboratory for Functional Genome Analysis LAFUGA, Gene Center, LMU München, München, Germany (1)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48149 Münster Germany (1)
Max Planck Institute for Molecular Biomedicine Bioanalytical Mass Spectrometry Röntgenstr. 20 48159 Münster Germany (1)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (1)
Priority Research Centre for Reproductive Science, Discipline of Biological Sciences, The University of Newcastle, Callaghan, NSW, 2300, Australia; School of Molecular Biosciences, Centre for Reproductive Biology, College of Veterinary Medicine, Washington State University, Pullman, WA, 99164, USA. (1)
Rajiv Gandhi Centre for Biotechnology Thycaud PO Poojappura Thiruvananthapuram Kerala 695 014, India (1)
Rajiv Gandhi Centre for Biotechnology Thycaud PO, Poojappura Trivandrum 695 014, Kerala, India (1)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing 211166, Jiangsu, China (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing, Jiangsu 210029, China. (1)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (1)

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Next Generation Sequencing Facilitates Quantitative Analysis of germ cell RA signaling mutant and control THY1+ spermatogonia Transcriptomes

Purpose: The goal of this sequencing is to investigate alterations in gene expression that result from impaired retinoid signaling compared with control, and how the RA signaling controls spermatogonia differentiation Methods: THY1+ spermatogonia mRNA profiles of 4-day-old control and germ cell spe...

ORGANISM(S): Mus musculus

2016-04-04 | E-GEOD-79863 | biostudies-arrayexpress

Spermatogonia & Buslfan

PRJNA691760 | ENA

Prepubertal Human Spermatogonia and Mouse Gonocytes Share Conserved Gene Expression of Germline Stem Cell Regulatory

Full title: Prepubertal Human Spermatogonia and Mouse Gonocytes Share Conserved Gene Expression of Germline Stem Cell Regulatory Molecules Oligonucleotide Microarray Analysis Reveals Novel Genes Expressed in Prepubertal Human Spermatogonia and Mouse Gonocytes Four hundred cells were selected for ea...

ORGANISM(S): Homo sapiens

2009-11-06 | E-GEOD-18914 | biostudies-arrayexpress

Transcription profiling of mouse spermatagonia stimulated with kit ligand, bone morphogenetic protein 4 (BMP4) or all-trans retinoic acid

wide genome analysis of difference in gene expression induced by treatment with kit ligand (KL), or bone mprphogenetic protein 4 (BMP4), or all-trans retinoic acid in spermatogonia from 7-day-old mice, using Mouse Genome 430 2.0 Array from Affymetrix, representing approximately 45000 mouse known gen...

ORGANISM(S): Mus musculus

2007-08-01 | E-MEXP-1126 | biostudies-arrayexpress

Identification of type A spermatogonia specific transcriptome in rainbow trout immature testis

To identify the transcripts preferentially expressed in type A spermatogonia in rainbow trout immature testis, we compared the transcriptome between type A spermatogonia and testicular somatic cells by microarry analysis. We used fluorescence-activated cell sorting (FACS) to isolate type A spermatog...

ORGANISM(S): Oncorhynchus mykiss

2012-06-11 | E-GEOD-38647 | biostudies-arrayexpress

Gene expression in undifferentiated spermatogonia

PRJNA605339 | ENA

RNA-seq in wild type and Bmi1 knockdown undifferentiated spermatogonia

Mammalian spermatogenesis is regulated by epigenetic mechanisms that maintain cell type-specific transcriptional programs. The epigenetic regulator BMI1, a PRC1 member, is required for maintaining undifferentiated spermatogonia, but the underlying mechanisms remain unclear. To address this issue, he...

ORGANISM(S): Mus musculus

2023-12-30 | E-MTAB-11777 | biostudies-arrayexpress

DAZL targets in undifferentiated spermatogonia

PRJNA605338 | ENA

Epigenetic programming of postnatal spermatogonia

PRJNA521513 | ENA

Transcriptomic analysis of mouse spermatogonia

PRJNA649964 | ENA