Sort   by:  
 Page size 
ProteomicssRNA scr5239 involved in important feedback loop of S. coelicolor central metabolism
The project is focused on the highly conserved sRNA scr5329 in Streptomyces coelicolor. A proteomics approach revealed that the sRNA regulates several metabolic enzymes, among them the Phosphoenolpyruvate-Carboxykinase (PEPCK), a key enzyme of the central carbon metabolism. The sRNA scr5239 promotes...
ORGANISM(S): Streptomyces coelicolor Bacteria 
2020-01-28 | PXD016811 | Pride
Carbon metabolism Srna Streptomyces Dasr 
GenomicsTranscriptome analysis of total RNA from the Rhodobacter sphaeroides 2.4.1 UdsC (sRNA) deletion mutant strain and UdsC (sRNA) overexpression strain under microaerobic growth conditions
Transcriptome analysis of total RNA from the Rhodobacter sphaeroides 2.4.1 UdsC (sRNA) deletion mutant strain and UdsC (sRNA) overexpression strain under microaerobic growth conditions
PRJNA892101 | ENA
ProteomicsCaulobacter crescentus GsrN overexpression proteome during hyperosmotic stress
In order to better define the global regulatory effects of the sRNA, GsrN, in Caulobacter crescentus during hyperosmotic stress, we submitted soluble lysates from a gsrN over-expression stain , as well as, a wild-type sample for LC-MS/MS analysis.
ORGANISM(S): Caulobacter crescentus CB15 
2019-11-12 | PXD010072 | Pride
Caulobacter crescentus Sucrose Srna overexpression Hyperosmotic stress 
TranscriptomicsTranscriptome analysis of total RNA from the Rhodobacter sphaeroides 2.4.1 UdsC (sRNA) deletion mutant strain and UdsC (sRNA) overexpression strain under microaerobic growth conditions
The sRNA UdsC ist derived from the 3´ UTR of RSP_7527. To analyse the effect of the sRNA on the transcriptome of R. sphaeroides we performed the RNAseq analysis with a chromosomal knockout and an inducible overexpression of this sRNA.
ORGANISM(S): Cereibacter sphaeroides 
2022-12-28 | GSE216116 | GEO
UnknownMechanism for coordinate regulation of rpoS by sRNA-sRNA interaction in Escherichia coli.
Not available
S-EPMC6973317 | biostudies-literature
ProteomicsTranscriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σE-dependent small RNA with unusual mRNA activation activity
The oral commensal Fusobacterium nucleatum can spread to extra-oral sites where it is associated with diverse pathologies including pre-term birth and cancer. Due to the evolutionary distance of F. nucleatum to other model bacteria, we lack a deeper understanding of RNA regulatory networks that allo...
ORGANISM(S): Fusobacterium nucleatum subsp. nucleatum ATCC 23726 
2024-02-08 | PXD047655 | Pride
Fusobacterium  srna  sigma e post-transcriptional regulation 
ProteomicsThe role of the sRNA GcvB in Pasteurella multocida protein production
In this study, transcriptomic analysis of the P. multocida strain VP161 revealed a putative sRNA with high identity to GcvB from Escherichia coli and Salmonella enterica serovar Typhimurium. High-throughput quantitative liquid proteomics was used to compare the proteomes of the P. multocida VP161 wi...
ORGANISM(S): Pasteurella multocida 
2019-11-12 | PXD007719 | Pride
Lc-ms/ms Pasteurella multocida Gcvb 
GenomicsTarget identification of the cold stress induced sRNA CisR in Lactococcus lactis
Target identification of the cold stress induced sRNA CisR in Lactococcus lactis
PRJNA476610 | ENA
UnknownEngineering of the Small Noncoding RNA (sRNA) DsrA Together with the sRNA Chaperone Hfq Enhances the Acid Tolerance of Escherichia coli.
Not available
S-EPMC8117753 | biostudies-literature
TranscriptomicsTarget identification of sRNA SmelC775
In this experiment we compare the transcriptome profiles of a SmelC775 overexpression strain to a control strain overexpressing a control RNA (SmelC812) (Schlueter et al. 2010).
ORGANISM(S): Sinorhizobium meliloti 
2015-12-01 | E-MTAB-3775 | biostudies-arrayexpress
Sort   by:  
 Page size