Stark M M - OmicsDI

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Unknown (1898)
Proteomics (144)
Transcriptomics (80)
Genomics (41)
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Models (3)

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Homo sapiens (106)
Mus musculus (23)
Drosophila melanogaster (15)
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cellular organisms (1)
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Organisms

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Homo sapiens (1)

Repository

biostudies-arrayexpress (95)
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Developmental and epileptic encephalopathy 9 (1)
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Technology Type

Mass Spectrometry (52)
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SWATH MS (3)
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ILLUMINA, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000, Illumina Genome Analyzer IIx (1)
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Instrument Platform

Illumina HiSeq 2000 (5)
TripleTOF 5600 (2)
Q Exactive (2)
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Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2020 (93)
2014 (18)
2013 (16)
2010 (16)
2015 (14)
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2012 (8)
2011 (6)
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2025 (5)
2016 (4)
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2008 (4)
2017 (3)
2005 (2)
2007 (2)
2018 (2)
2006 (1)
2019 (1)

UNIPROT ID/AC

14310_ARATH (3)
14311_ARATH (3)
14332_ARATH (3)
14333_ARATH (3)
14334_ARATH (3)
14335_ARATH (3)
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3702.AT3G04400.1 (3)
3702.AT3G53750.1 (3)
3702.AT3G56800.1 (3)
3702.AT3G59540.1 (3)
3702.AT3G62840.1 (3)
3702.AT4G09800.1 (3)
P06239 (1)
P29350 (1)

CHEBI ID

CHEBI:18012 (2)
CHEBI:6650 (2)
CHEBI:15428 (1)
CHEBI:15741 (1)
CHEBI:15756 (1)
CHEBI:15963 (1)
CHEBI:16010 (1)
CHEBI:16196 (1)
CHEBI:16384 (1)
CHEBI:165803 (1)
CHEBI:17084 (1)
CHEBI:17148 (1)
CHEBI:17234 (1)
CHEBI:17417 (1)
CHEBI:17754 (1)
CHEBI:17818 (1)
CHEBI:17822 (1)
CHEBI:18257 (1)
CHEBI:24848 (1)
CHEBI:27897 (1)
CHEBI:28044 (1)
CHEBI:28527 (1)
CHEBI:28842 (1)
CHEBI:30915 (1)
CHEBI:32816 (1)
CHEBI:33508 (1)
CHEBI:42111 (1)
CHEBI:65665 (1)
CHEBI:70976 (1)
CHEBI:72868 (1)

Metabolite Name

2-hydroxyglutaric acid (1)
2-ketoglutaric acid (1)
5-oxoproline (1)
Acetyl tryptophan (1)
Caffeoyl putrescine (1)
Caffeoyl quinic acid (1)
Cholesterol sulfate (1)
Coumaroyl tyramine (1)
Dihydroxy eicosatetraenoic acid (DiHETE) (1)
FA(14:0) (1)
FA(15:0) (1)
FA(16:0) (1)
FA(18:0) (1)
FA(20:0) (1)
Feruloyl serotonin (1)
Feruloyl tyramine (1)
Fumaric acid (1)
Glucose (1)
Indole acrylic acid (1)
Inositol (1)
LPA(18:0) (1)
LPA(18:1) (1)
LPC(14:1) (1)
LPC(16:1) (1)
LPC(18:2) (1)
LPC(20:5) (1)
LPE(14:0) (1)
LPE(14:1) (1)
LPE(16:0) (1)
LPE(16:1) (1)

First Public Date

2022 (1)
2019 (1)
2016 (1)
2015 (1)

Modelling Approach

Ordinary differential equation model (2)

Lab affiliation

Director at Max Planck Institute of Biochemistry Department Proteomics und Signaltransduktion Am Klopferspitz 18, 82152 Martinsried (2)
Director, Translational Proteomics Research Unit, IRCM Director, Biomarker Pipeline for Precision Medicine Strategic Initiative Full IRCM Research Professor Full Research Professor, Department of Biochemistry and Molecular Medicine (accreditation for the Molecular Biology Programs), Université de Montréal Holder of the Bell-Bombardier Chair of Excellence Person in charge of responsible conduct of research, IRCM (2)
School of Biosciences, University of Sheffield, Sheffield, UK (2)
1Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Melbourne, VIC, 3010, Australia 2Murdoch Children’s Research Institute, Melbourne, VIC 3052, Australia 3Victorian Clinical Genetics Services, Murdoch Children’s Research Institute, Melbourne, VIC, 3052, Australia (1)
Australian Centre for Water and Environmental Biotechnology (formerly AWMC), University of Queensland (1)
Berlin Institute of Health (BIH) at Charité – Universitätsmedizin Berlin, BIH Center for Regenerative Therapies (BCRT), Experimental Immunotherapy (1)
Bioanalytical Mass Spectrometry Group, Max Planck Institute for Multidisciplinary Sciences, Germany Bioanalytics, Institute for Clinical Chemistry, University Medical Center Goettingen, Germany (1)
Bioanalytical Mass spectroscopy Group, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany; Bioanalytics, Institute for Clinical Chemistry, University Medical Center Göttingen, Germany (1)
Biozentrum, University of Basel, Switzerland (1)
CNB-CSIC (1)
Cancer Research UK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 0RE, UK (1)
Center for Proteomics and Metabolomics, Leiden University Medical Center, The Netherlands (1)
Centre for Gene Regulation and Expression, Sir James Black Centre, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH. UK. (1)
Chair of Phytopathology, TUM School of Life Sciences Technische Universitaet Muenchen, Freising-Weihenstephan, Germany (1)
Clinical Neuroproteomics Unit Navarrabiomed Proteored-ISCIII Pamplona-Spain (1)
Department of Biochemistry and Molecular Biology, Sidney Kimmel Medical College, Thomas Jefferson University, 233 S 10th Street, BLSB 826, Philadelphia, PA, 19104 (1)
Department of Cell Biology and Molecular Genetics University of Maryland (1)
Department of Chemistry, Stanford University Stanford ChEM-H (1)
Department of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Martinsried, Germany (1)
Director of Proteomics Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark and Director of Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Germany (1)
Director of Proteomics Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Denmark and Director of Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Germany (lab head) (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung 17487 Greifswald Germany (1)
Dr. Elke Hammer Universitätsmedizin Greifswald Interfakultäres Institut für Genetik und Funktionelle Genomforschung Abteilung für Funktionelle Genomforschung Felix-Hausdorff-Straße 8 17487 Greifswald Germany (1)
Dr. Uwe Linne Philipps-Universität Marburg Fachbereich Chemie und Synmikro Gerätezentrum Massenspektrometrie und Elementanalaytik Hans-Meerwein-Str. 4 35032 Marburg, GERMANY (1)
German Diabetes Center (DDZ) Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf Auf´m Hennekamp 65 40225 Düsseldorf, Germany Tel.: +49-(0)-211-33-82-451 (1)
German Diabetes Center (DDZ) Leibniz Center for Diabetes Research at Heinrich Heine University Düsseldorf Auf´m Hennekamp 65 40225 Düsseldorf, Germany phone : +49-(0)-211-33-82-451 Legal body: Deutsche Diabetes-Forschungsgesellschaft e.V. (1)
Goethe-Universität Frankfurt, Georg-Speyer-Haus, Paul-Ehrlich-Str. 42-44, Frankfurt am Main, GERMANY (1)
Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, Western Australia 6009, Australia (1)
Harvard Institutes of Medicine 2nd floor, Room 221 4 Blackfan Circle Boston, MA 02115 (1)
IMP, Vienna Biocenter, Vienna, Austria (1)

IsPrivate

False (2)

Classification

bacteria (1)

Study type

Transcription profiling by array (38)
ChIP-seq (17)
RNA-seq of non coding RNA (11)
RNA-seq of coding RNA (8)
Methylation profiling by array (6)
Other (5)
ChIP-chip by tiling array (3)
ChIP-chip by array (2)
Genotyping by array (2)
Comparative genomic hybridization by array (2)
Transcription profiling by high throughput sequencing (1)

Release Date

2025 (232)
2022 (193)
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2020 (154)
2019 (120)
2018 (99)
2017 (81)
2015 (78)
2016 (77)
2014 (70)
2013 (63)
2011 (55)
2012 (50)
2010 (44)
2009 (29)
2026 (29)
2008 (21)
2007 (11)
2006 (7)
2005 (6)
2004 (5)
2001 (4)
2000 (2)
2003 (1)
2002 (1)
1998 (1)

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Single and double activation of acetone by isolobal B[triple bond, length as m-dash]N and B[triple bond, length as m-dash]B triple bonds.

Not available

S-EPMC6009441 | biostudies-literature

Vibrational stark effect probes for nucleic acids.

Not available

S-EPMC2546494 | biostudies-literature

Conserved patterns hidden within group A Streptococcus M protein hypervariability recognize human C4b-binding protein.

Not available

S-EPMC5014329 | biostudies-literature

Structural Phase Transitions and Magnetic Superexchange in M^I Ag^II F₃ Perovskites at High Pressure.

Not available

S-EPMC9320850 | biostudies-literature

Identification of transcription factor binding sites from ChIP-seq data at high-resolution

Genome-wide mapping of proteinM-bM-^@M-^SDNA interactions is essential for a full understanding of transcriptional regulation. A precise map of binding sites for transcription factors, core transcriptional machinery is vital for deciphering the gene regulatory networks that underlie various biologic...

ORGANISM(S): Drosophila melanogaster

2014-02-06 | E-GEOD-40664 | biostudies-arrayexpress

A functional genomics approach identifies the GATA factor SERPENT as a tissue-specific partner of CLOCK/CYCLE in the Drosophila circadian clock

Broadly expressed transcriptions factors (TFs) control tissue-specific programs of gene expression through interactions with local TF networks. Prime examples are the circadian clock TFs CLOCK (CLK) and CYCLE (CYC or BMAL1): while they control a core transcriptional circuit throughout animal bodies,...

ORGANISM(S): Drosophila melanogaster

2013-06-01 | E-GEOD-40467 | biostudies-arrayexpress

Matrix-induced Linear Stark Effect of Single Dibenzoterrylene Molecules in 2,3-Dibromonaphthalene Crystal.

Not available

S-EPMC6391937 | biostudies-literature

Large polarization-dependent exciton optical Stark effect in lead iodide perovskites.

Not available

S-EPMC5013647 | biostudies-literature

The association between autoimmune disease and 30-day mortality among sepsis ICU patients: a cohort study.

Not available

S-EPMC6423870 | biostudies-literature

Selectively tunable optical Stark effect of anisotropic excitons in atomically thin ReS₂.