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TranscriptomicsRNA-Seq of synovial tissue biopsies from individuals with rheumatoid arthritis from the STRAP randomised clinical trial
Transcriptomic profiles of synovial biopsies of rheumatoid arthritis (RA) patients recruited into the STRAP randomised clinical trial: RNA-Seq data from 210 patients at baseline. Patients were randomly assigned to etanercept, tocilizumab and rituximab. For the full study protocol and baseline patien...
ORGANISM(S): Homo sapiens 
2025-04-28 | E-MTAB-13733 | biostudies-arrayexpress
ProteomicsSTRAP regulates alternative splicing fidelity during lineage commitment of mouse embryonic stem cells
STRAP protein was IP'd and corresponding binding proteins were identified by high resolution nanoLCMS2 vs a control experiment.
ORGANISM(S): Mus musculus (Mouse) 
2020-09-10 | PXD015371 | Pride
Proteomics Strap Stem cells 
ProteomicsSiTrap versus STrap comparison
These are supporting RAW files for the 'Detergent-free simultaneous sample preparation method for proteomics and metabolomics' SiTrap method manuscript. MDA-MB-231 cells were processed either by SiTrap methodology using SiTrap cellulose tips and two different extraction solutions or by STrap method ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-10-02 | MSV000084406 | MassIVE
GenomicsNext generation sequencing facilitates quantitative analysis of STRAP-dependent alternative splicing events
Next generation sequencing facilitates quantitative analysis of STRAP-dependent alternative splicing events
PRJNA543790 | ENA
GenomicsSerine-Threonine Kinase Receptor-Associated Protein (STRAP) Knockout Decreases the Malignant Phenotype in Neuroblastoma
Serine-Threonine Kinase Receptor-Associated Protein (STRAP) Knockout Decreases the Malignant Phenotype in Neuroblastoma
PRJNA716269 | ENA
GenomicsSTRAP is involved in mutated Apc-induced stemness and tumorigenesis in colon cancer
STRAP is involved in mutated Apc-induced stemness and tumorigenesis in colon cancer
PRJNA673189 | ENA
ProteomicsSuspension TRAPping filter (sTRAP) sample preparation for quantitative proteomics in the low µg input range using a plasmid DNA micro-spin column: analysis of the hippocampus from the 5xFAD Alzheimer’s Disease mouse model
Suspension TRAPping filter (sTRAP) is an attractive sample preparation method for proteomics study. Here, we demonstrated the use of a low-cost Plasmid DNA spin column for sTRAP. We first evaluated, the reproducibility of this protocol and the low CoV using 4 replicates of 5-10 µg of a synapse enric...
ORGANISM(S): Mus musculus (Mouse) 
2023-05-23 | PXD041045 | Pride
Alzheimer’s disease Proteomics 5xfad mouse model Micro-spin column Strap 
TranscriptomicsSerine-Threonine Kinase Receptor-Associated Protein (STRAP) Knockout Decreases the Malignant Phenotype in Neuroblastoma
Purpose: Serine-threonine kinase receptor-associated protein (STRAP) plays an important role in neural development but also in tumor growth. Neuroblastoma, a tumor of neural crest origin, is the most common extracranial malignancy of childhood, and it continues to carry a poor prognosis. The recent ...
ORGANISM(S): Homo sapiens 
2021-07-14 | GSE169322 | GEO
GenomicsTranscriptome-wide maps of STRAP-RNA interactions in mouse early embryo and lineage-committed cells.
Transcriptome-wide maps of STRAP-RNA interactions in mouse early embryo and lineage-committed cells.
PRJNA543791 | ENA
TranscriptomicsNext generation sequencing facilitates quantitative analysis of STRAP-dependent alternative splicing events
We report the application of next generation sequencing for evaluating alternative splicing (AS) events on lineage-committed WT and Strap-KO embryoid body (EB) cells. We also analyzed AS during mouse embryo development using RNA-seq data. Of all STRAP-regulated AS, exon-skipping events were the most...
ORGANISM(S): Mus musculus 
2020-09-16 | GSE131471 | GEO
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