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ProteomicsArabidopsis thylakoid domains proteome
The thylakoid membrane in land plants is organized into an appressed domain (grana), enriched in photosystem (PS) II, and a non-appressed domain (stroma lamellae) enriched in PSI. This ultrastructure ensures control over excitons spillover from PSII to PSI. The bulky machinery required for the repai...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2025-02-11 | PXD046544 | Pride
Arabidopsis thaliana Thylakoid membrane Curvature Grana margins Grana core Stroma lamellae Thylakoid domains Connecting domain 
TranscriptomicsGene expression profiles of reactive stroma in prostate cancer
This is an analysis of stroma from 17 Grade 3 reactive stroma prostate cancer tissues and matched normal peripheral zone tissues. Keywords: two group comparison Laser capture microdissection and expression array analysis of stroma from 17 Grade 3 reactive stroma prostate cancer tissues and matched ...
ORGANISM(S): Homo sapiens 
2009-06-01 | E-GEOD-11682 | biostudies-arrayexpress
ProteomicsDeciphering thylakoid microdomains using a mass spectrometry-based approach
In photosynthetic eukaryotes, photosynthesis occurs in the chloroplast, and more specifically in the thylakoid membranes. The thylakoids consist of two main domains: the grana, which are piles of membranes gathered together by stacking forces, and the stroma-lamellae, which are unstacked thylakoids ...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-09-23 | PXD000546 | Pride
Clustering Grana Chloroplast Thylakoid Stroma-lamellae Statistical analysis Subcellular localization Label-free quantitation 
UnknownSecond harmonic generation imaging of corneal stroma after infection by Pseudomonas aeruginosa.
Not available
S-EPMC5387403 | biostudies-literature
UnknownElastic microfibril distribution in the cornea: Differences between normal and keratoconic stroma.
Not available
S-EPMC5451143 | biostudies-literature
TranscriptomicsPrognostic Gene Expression Signature of Carcinoma Associated Fibroblasts in Non-Small Cell Lung Cancer [expression profiling_NSCLC stroma]
The tumor microenvironment strongly influences cancer development, progression and metastasis. The role of carcinoma-associated fibroblasts (CAFs) in these processes and their clinical impact has not been studied systematically in non-small cell lung carcinoma (NSCLC). We established primary culture...
ORGANISM(S): Homo sapiens 
2011-04-08 | E-GEOD-22863 | biostudies-arrayexpress
TranscriptomicsThe Effects of Aging on the Molecular and Cellular Composition of the Prostate Microenvironment
Advancing age is associated with substantial increases in the incidence rates of common diseases affecting the prostate including benign prostatic hyperplasia (BPH) and prostate carcinoma. However, to date, there is no established molecular explanation for the age-dependent increases in these pathol...
ORGANISM(S): Mus musculus 
2010-09-15 | E-GEOD-21542 | biostudies-arrayexpress
TranscriptomicsHigh throughput gene expression analysis identifies reliable expression markers of human corneal endothelial cells.
Considerable interest has been generated for the development through cell-tissue engineering of suitable corneal endothelial graft alternatives, which can potentially alleviate the shortage of corneal transplant material. The advent of less invasive suture-less key-hole surgery options such as Desce...
ORGANISM(S): Homo sapiens 
2013-05-23 | E-GEOD-44064 | biostudies-arrayexpress
TranscriptomicsMolecular Signature of Pregnancy Associated Breast Cancer (PABC)
Malignant epithelia and tumor-associated stroma of PABC and Non-PABC were isolated by laser capture microdissection and gene expression profiled. Additionally, normal breast epithelia and stroma adjacent to the two tumor types were profiled. Lastly, subsets of previously identified E- and P-regulate...
ORGANISM(S): Homo sapiens 
2013-06-26 | E-GEOD-31192 | biostudies-arrayexpress
TranscriptomicsAnalysis of tumor- and stroma-supplied proteolytic networks in different metastatic tumor microenvironments identifies a critical role for cathepsin S in brain metastasis
Metastasis is a multistage process that requires cancer cells to escape from the primary tumor, survive in the circulation, seed at distant sites and colonize these foreign tissue environments. Each of these processes involves rate-limiting steps that are influenced by stromal cells of the tumor mic...
ORGANISM(S): Homo sapiens 
2014-07-04 | E-GEOD-47930 | biostudies-arrayexpress
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