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TranscriptomicsQuantitative Mammalian Transcriptomics using Designed Primer-based Amplification
We describe a novel quantitative cDNA expression profiling strategy, involving amplification of the majority of mouse transcriptome using a defined set of 44 heptamer primers. The amplification protocol allows for efficient amplification from as low as 50pg of mRNA and did not alter the expression o...
ORGANISM(S): Mus musculus 
2013-04-29 | E-GEOD-45474 | biostudies-arrayexpress
TranscriptomicsIdentification of therapeutic targets for glioblastoma by network analysis
In this study, we confirmed that transformed dedifferentiated astrocytes and neurons acquired a stem/progenitor cell state, although they still retained gene expression memory from their parental cell-type. Transcriptional network analysis on transformed cells revealed up-regulation of genes involve...
ORGANISM(S): Mus musculus 
2015-05-11 | E-GEOD-64411 | biostudies-arrayexpress
ModelsGupta2009 - Eicosanoid Metabolism
Gupta2009 - Eicosanoid Metabolism Integrated model of eicosanoid metabolism and signaling based on lipidomics flux analysis. This model is described in the article: An integrated model of eicosanoid metabolism and signaling based ...
2024-09-02 | BIOMD0000000436 | BioModels
TranscriptomicsTechnical Variations in Low-Input RNA-seq Methodologies
Transcriptomics data obtained from limiting amounts of mRNA is often noisy, providing primarily qualitative changes in transcript expressions. So far, technical variations arising out of the library preparation protocols have not been adequately characterized at reduced levels of mRNA. Here, we gene...
ORGANISM(S): Mus musculus 
2014-01-13 | E-GEOD-50856 | biostudies-arrayexpress
TranscriptomicsTranscriptional Alterations of Hamstring Muscle Contractures in Children with Cerebral Palsy
Cerebral palsy is primarily an upper motor neuron disease that results in a spectrum of progressive movement disorders. Secondary to the neurological lesion, muscles from patients with cerebral palsy are often spastic and form debilitating contractures that limit range of motion and joint function....
ORGANISM(S): Homo sapiens 
2012-11-21 | E-GEOD-31243 | biostudies-arrayexpress
UnknownTemporal mechanisms of myogenic specification in human induced pluripotent stem cells.
Not available
S-EPMC7968833 | biostudies-literature
UnknownModular and mechanistic changes across stages of colorectal cancer.
Not available
S-EPMC9022252 | biostudies-literature
UnknownAttractor Ranked Radial Basis Function Network: A Nonparametric Forecasting Approach for Chaotic Dynamic Systems.
Not available
S-EPMC7052196 | biostudies-literature
UnknownDysregulated mechanisms underlying Duchenne muscular dystrophy from co-expression network preservation analysis.
Not available
S-EPMC4424514 | biostudies-literature
UnknownStatistical insights into major human muscular diseases.
Not available
S-EPMC4415066 | biostudies-literature
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