Sugiyama M M - OmicsDI

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Unknown (1423)
Proteomics (30)
Transcriptomics (27)
Metabolomics (4)
Genomics (1)

Organisms

Homo sapiens (21)
Mus musculus (10)
Arabidopsis thaliana (7)
Schizosaccharomyces pombe (3)
Marchantia polymorpha (3)
cellular organisms (2)
Escherichia coli (2)
Rana pirica (1)
Chlamydomonas (1)
Helicobacter pylori (1)
Helicobacter pylori F16 (1)
Helicobacter pylori F30 (1)
Helicobacter pylori F32 (1)
Helicobacter pylori OK113 (1)
Helicobacter pylori OK310 (1)
Bacillus subtilis subsp. subtilis str. 168 (1)
Bacteria (1)
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (1)
Schizosaccharomyces (1)
Schizosaccharomyces japonicus (1)
Schizosaccharomyces pombe 972h- (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (27)
pride (15)
jPOST (12)
MetaboLights (4)
MassIVE (3)
ENA (1)

Tissue

Cell culture (7)
Plant cell (4)
Epithelial cell (3)
Vegetative cell (2)
Cell suspension culture (1)
Permanent cell line cell (1)
Root (1)
Shoot (1)
Whole body (1)

Disease

Colon cancer (2)
Disease free (1)
Multiple myeloma (1)
Tongue squamous cell carcinoma (1)

Technology Type

Mass Spectrometry (15)
Shotgun proteomics (12)
Mass spectrometry (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Mass spectrometry assay (1)
Bottom-up proteomics (1)
Gel-based experiment (1)

Instrument Platform

Q Exactive (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
G2565BA DNA microarray scanner [Agilent] (1)
LTQ Orbitrap Velos (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)

Publication Date

2015 (6)
2011 (6)
2013 (5)
2019 (5)
2026 (4)
2016 (3)
2014 (3)
2007 (3)
2021 (3)
2018 (3)
2017 (3)
2023 (3)
2012 (2)
2009 (2)
2020 (2)
2025 (2)
2010 (1)
2008 (1)
2005 (1)
2022 (1)
2024 (1)

CHEBI ID

CHEBI:15354 (2)
CHEBI:15676 (2)
CHEBI:15793 (2)
CHEBI:15887 (2)
CHEBI:15940 (2)
CHEBI:16040 (2)
CHEBI:16235 (2)
CHEBI:16244 (2)
CHEBI:16335 (2)
CHEBI:16347 (2)
CHEBI:16359 (2)
CHEBI:16467 (2)
CHEBI:16543 (2)
CHEBI:16643 (2)
CHEBI:16704 (2)
CHEBI:16708 (2)
CHEBI:16737 (2)
CHEBI:16856 (2)
CHEBI:16919 (2)
CHEBI:17154 (2)
CHEBI:17191 (2)
CHEBI:17295 (2)
CHEBI:17368 (2)
CHEBI:17562 (2)
CHEBI:17568 (2)
CHEBI:17596 (2)
CHEBI:17750 (2)
CHEBI:17752 (2)
CHEBI:17821 (2)
CHEBI:17929 (2)

Metabolite Name

2-Aminophenol (2)
Acetylcarnitine (2)
Adenine (2)
Adenosine (2)
Betaine (2)
Choline (2)
Creatine (2)
Creatinine (2)
Cytidine (2)
Cytosine (2)
Guanine (2)
Hypoxanthine (2)
L-Carnitine (2)
L-Isoleucine (2)
L-Methionine (2)
L-Phenylalanine (2)
Theobromine (2)
Thymine (2)
Trigonelline (2)
Uracil (2)
Xanthine (2)
(+)-Costunolide (1)
(S)-Dihydroorotate (1)
1,2-Cyclohexanedione (1)
1,4-Cyclohexanedicarboxylic Acid (1)
1,4-Cyclohexanedione (1)
1,5-Naphthalenediamine (1)
1-Aminocyclopropane-1-Carboxylate (1)
1-Heptadecanoyl-2-Hydroxy-Sn-Glycero-3-Phosphocholine (1)
1-Imidazoleacetic acid (1)

First Public Date

2014 (1)

Study type

Transcription profiling by array (24)
ChIP-chip by tiling array (2)
Other (1)

Release Date

2022 (184)
2023 (160)
2021 (150)
2025 (127)
2024 (124)
2020 (123)
2019 (79)
2018 (75)
2017 (70)
2015 (69)
2016 (59)
2014 (53)
2026 (33)
2013 (31)
2012 (30)
2011 (19)
2009 (19)
2010 (11)
2005 (10)
2006 (6)
2007 (4)
2002 (4)
2000 (3)
2008 (2)
2004 (1)
2003 (1)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (3)
OncoProteomics Laboratory, Dept of Medical Oncology, VU University Medical Center, Amsterdam, The Netherlands (2)
De[artment of Molecular and Cellular Bioanalysis, Graduate School of Pharmaceutical Sciences, Kyoto University (1)
Department of Laboratory Medicine, University of California, San Francisco, USA (1)
Department of Molecular and Cellular Bioanalysis, Graduate School of Pharmaceutical Sciences, Kyoto University, Japan (1)
Department of Molecular and Cellular Bioanalysis, Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 606-8501, Japan. (1)
ETH Zurich, Institute of Molecular Systems Biology (1)
Marine Chemistry and Geochemistry Woods Hole Oceanographic Institute (1)
Proteomics Research Translational Technology Platform, Cancer Research UK-UCL Centre, UCL Cancer Institute, University College London, UK ( lab head ) (1)
School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China. (1)
ShanghaiTech University - Zhangjiang Campus: ShanghaiTech University Shanghai, CHINA (1)
University of Wisconsin-Madison. Biochemistry Dept. Biotechnology Center. (1)

Tags

xref:PubMed:19228201 (1)
xref:PubMed:26171167 (1)

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Epithelium-Intrinsic MicroRNAs Contribute to Mucosal Immune Homeostasis by Promoting M-Cell Maturation.

Not available

S-EPMC4773159 | biostudies-literature

Randomized phase III trial comparing pegylated liposomal doxorubicin (PLD) at 50 mg/m² versus 40 mg/m² in patients with platinum-refractory and -resistant ovarian carcinoma: the JGOG 3018 Trial.

Not available

S-EPMC7767649 | biostudies-literature

Syntheses and structures of ammonium transition-metal dialuminium tris-(phosphate) dihydrates (NH₄)MAl₄(PO₄)₃·2H₂O (M = Mn and Ni).

Not available

S-EPMC9912463 | biostudies-literature

Molecular characteristics of CTX-M β-lactamase-producing and quinolone-resistant Escherichia coli among deer in a popular tourist spot in Japan.

Not available

S-EPMC11556432 | biostudies-literature

Association between the bla_CTX-M-14-harboring Escherichia coli Isolated from Weasels and Domestic Animals Reared on a University Campus.

Not available

S-EPMC8069031 | biostudies-literature

Oncostatin M inhibits proliferation of rat oval cells, OC15-5, inducing differentiation into hepatocytes.

Not available

S-EPMC1602354 | biostudies-literature

An SRY homolog cooperates with a transposon-derived CENP-B protein to control sex-specific directed recombination

Occupancy profiling of Myc tagged Mc protein in fission yeast. Agilent 60mer array was used to analyze DNA recovered by immunoprecipitation of Mc-myc protein from culture of fission yeast.

ORGANISM(S): Schizosaccharomyces pombe

2011-11-21 | E-GEOD-32996 | biostudies-arrayexpress

Differential phosphoproteomics upon chitin-treatment in Marchantia polymorpha

Pattern-recognition receptor (PRR)-triggered immunity (PTI) plays a pivotal role in plant immunity to ward off a wide range of pathogenic microbes. The model liverwort Marchantia polymorpha is gaining popularity in investigating the evolution of plant-microbe interactions. The M. polymorpha is capab...

ORGANISM(S): Marchantia polymorpha

2023-08-24 | PXD038903 | Pride

Differential phosphoproteomics upon chitin- or blue-light treatment in Marchantia polymorpha

ORGANISM(S): Marchantia polymorpha

2023-08-24 | PXD038907 | Pride

Marchantia polymorpha Pti Phosphoproteomics Plant immunity

Identification of immunodominant neutralizing epitopes on the hemagglutinin protein of rinderpest virus.

Not available

S-EPMC135923 | biostudies-literature

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1485 Results

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