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MetabolomicsSuboxic DOM is bioavailable to surface prokaryotes in a simulated overturn of an oxygen minimum zone, Devil’s Hole, Bermuda
Oxygen minimum zones (OMZs) are expanding due to increased sea surface temperatures, subsequent increased oxygen demand through respiration, reduced oxygen solubility, and thermal stratification driven in part by anthropogenic climate change. Devil's Hole, Bermuda is a model ecosystem to study OMZ m...
2024-02-27 | MTBLS8122 | MetaboLights
MetabolomicsMetabolites from surface seawater collected in Narragansett Bay
In aquatic environments, the production and consumption of organic compounds is directly tied to the metabolic potential of the in situ microbial community. The community’s metabolic potential can be assessed using metatranscriptomics, which is a measure of gene expression in the environment. More r...
2016-01-14 | MTBLS293 | MetaboLights
ProteomicsIsomeric Differences in Nanoparticle’s Surface Chemistry Alters Macrophage Interactions In Vitro Due to Protein Corona
The interactions of nanoparticles (NPs) with macrophages after intravenous injection are critical in determining their biodistribution and pharmacokinetics. The formation of protein corona (PC) on the nanoparticles, often a result of NP-plasma protein interactions, influences macrophage response, th...
ORGANISM(S): Homo sapiens (Human) 
2025-10-06 | PXD051722 | Pride
Protein corona 
UnknownComparative Study of NAP-XPS and Cryo-XPS for the Investigation of Surface Chemistry of the Bacterial Cell-Envelope.
Not available
S-EPMC8132101 | biostudies-literature
UnknownImpact of surface chemistry.
Not available
S-EPMC3024684 | biostudies-literature
ProteomicsSurface glycoproteome of BACE1-inhibited neurons
The cell surface proteome is dynamic and has fundamental roles in cell signaling. Many surface membrane proteins are proteolytically released into a cell’s secretome, where they can have additional functions in cell-cell-communication. Yet, it remains challenging to determine the surface proteome an...
ORGANISM(S): Mus musculus (Mouse) 
2018-05-08 | PXD008619 | Pride
Bace1 Surface N-glycoproteome Murine neurons 
TranscriptomicsGlobal genetic impact of surface-modified gold nanoparticles on two model human cell lines
Gold nanoparticles (Au NPs) are uniquely suited for various biomedical applications due to the combination of their optical properties with their easily functionalized surfaces. The Au NP surface can be tailored to improve biocompatibility while also attaching targeting ligands or drugs. However, in...
ORGANISM(S): Homo sapiens 
2014-10-01 | E-GEOD-56432 | biostudies-arrayexpress
ProteomicsSelective Regulation of Macrophage Lipid Metabolism via Nanomaterials’ Surface Chemistry
Understanding the interfacial structure between nanomaterials and lipoproteins is crucial for gaining profound insights into how nanomaterials impact lipoprotein structure and interfere with lipid metabolism. In this study, we employed graphene oxide (GO) nanosheets (NSs) with precisely controlled s...
ORGANISM(S): Homo sapiens (Human) 
2025-05-06 | PXD044475 | Pride
Human plasma Low density lipoprotein Lc-ms Lipid metabolism Graphene oxide Surface hydrophilicity 
UnknownSurface functionalization of exosomes using click chemistry.
Not available
S-EPMC4198107 | biostudies-literature
GenomicsLow-Dose Silver Nanoparticle Surface Chemistry and Temporal Effects on Gene Expression in HepG2 Cells
Low-Dose Silver Nanoparticle Surface Chemistry and Temporal Effects on Gene Expression in HepG2 Cells
PRJNA601434 | ENA
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